TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTACAAATCCGCGGA
ATTCAGCAGTTAGATATCTCTATAGTTTTAATTTTCTATGTAATGCAGTT
GATATATCACATCATCCATGTACATATAAAACAATGTCCTGTTTGCAAAT
GTCATTTGTTTTCAGAATTATGGTGACATTTCTCAGTCTTTTCTAATCTT
CATCCTGTTTCCACACATACGGGCTACATAATCCTGTTTTGCTTTACAGA
ATTTGTTACAATACATGCTACCAAGTAAGTACAATAATTAAAAATGCTTT
TATTATGTTTTTGAATTATGCTTGTACATGTATGTGTGTTTGTATGAATG
TGTCTGCACACACACCTCAGAACCGGCATCCAAAGACCCGTGAATATAGT
GATCATAAAACTACTATGGTCACTTATATATACTATCATATCATCTGCAA
AAAGTGATATTTTGACTTCTTCCTTTCCAATTTGTATCCCCTTGATCTCC
TTTTGTTGTCTAATTGTTCTGGCTAGGACTTCAAGTACAATGTTGAATAG
GTAGGGCGAGAGTGTACAGCCTTGTCTAGTCCCTGATTTTAATGGGATTG
CTTCCAGCTTTCTCCCATTTACTTTGATGTGGGCTATTGGTTTGCTGTAC
ATTGCTTTTATCATGATTAAGTATGGGCCTTGAACTTCTGATCTTTCCAA
AACTTTTATCATGAATTGGGTGTTGGAT

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGTTAATACTCTGTCCTTATTTTTG
TGTTTGTTTGGTTTGTTCATTTGTGTGTTAGGAGACTTTTAATGTCTGGT
CTATTTGCATATAAGTTGTCGAAATACTGATTCAAAAAAATCATTTTTTT
TTGTCTGATCTTGACTTAAGTTTGGCTTTGGTATCTCTCAAAAAGACTGT
CCATTTCTTTCTATTTTCCAATTTTGTGGCTACAGGTTTTTCAGATATGA
CCAAATGATTCTTCTCATTACTTGGTATCTGTTGCTATCTCCCCCTTAGC
ATTTCTAACTTTGATAATTTGGATAGTCTTTGTCTTTTAGTTAGTTTAGA
TAAAGGTTTGTTTTGTCTTGTTGACTTTCTCAAAGACCAACTCTTGGTTT
CATTGAATCTTTGTTTTGTTCTTTTTTTTTTTATCATTTTCAGCCCTGTT
TGATTACTTCTTCCTTCTCTTCCTCTTGGGTGGATTTGCTTCTTTTTGTT
TTAGAGGATTCAGGTGTGCTGAGAAGTGGCTAGTTTGAAATATATGCAAA
TTCTACATTAAAGCACTTAACGCTGTGACCTTTCCTCCTAAAACTTCTTT
CATAACGCTTCATAAATTGGGGTATGTTATCCTTCCCATTTTAATTAATT
TTTACAGAAGTTTTACACTTCTATCTTCAA

Query= MSMg01no325_c06.b1 MSMg01no325_c06.b1 CHROMAT_FILE:
MSMg01no325_c06.b1 PHD_FILE: MSMg01no325_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:37 2005
         (501 letters)



>mm_chr6_75831960_75832860
          Length = 901

 Score =  874 bits (452), Expect = 0.0
 Identities = 485/496 (97%), Gaps = 2/496 (0%)
 Strand = Plus / Minus

                                                                       
Query: 7   ttcagcagttagatatctctatagttttaattttctatgtaatgcagttgatatatcaca 66
           ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttcagcaattagagatttctatagttttaattttctatgtaatgcagttgatatatcaca 510

                                                                       
Query: 67  tcatccatgtacatataaaacaatgtcctgtttgcaaatgtcatttgttttcagaattat 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tcatccatgtacatataaaacaatgtcctgtttgcaaatgtcatttgttttcagaattat 450

                                                                       
Query: 127 ggtgacatttctcagtcttttctaatcttcatcctgtttccacacatacgggctacataa 186
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 449 ggtgacatttctcagtcttttctaatcttcatcatgtttccacacatacgggctacataa 390

                                                                       
Query: 187 tcctgttttgctttacagaatttgttacaatacatgctaccaagtaagtacaataattaa 246
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 389 tcctgttttgctttacagaatttgttacaatacatgctaccaagtaaatacaataattaa 330

                                                                       
Query: 247 aaatgcttttattatgtttttgaattatgcttgtacatgtatgtgtgtttgtatgaatgt 306
           ||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||
Sbjct: 329 aaatgcttttattatgtttttgaataatgcttgtacatgtatgtatgattgtatgaatgt 270

                                                                       
Query: 307 gtctgcacacacacctcagaacc-ggcatccaaagacccgtgaatatagtgatcataaaa 365
           ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 269 gtctgcacacacacctcagaaccagg-atccaaagacccgtgaatatagtgatcataaaa 211

                                                                       
Query: 366 ctactatggtcacttatatatactatcatatcatctgcaaaaagtgatattttgacttct 425
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ctactatggccacttatatatactatcatatcatctgcaaaaagtgatattttgacttct 151

                                                                       
Query: 426 tcctttccaatttgtatccccttgatctccttttgttgtctaattgttctggctaggact 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tcctttccaatttgtatccccttgatctccttttgttgtctaattgttctggctaggact 91

                           
Query: 486 tcaagtacaatgttga 501
           ||||||||||||||||
Sbjct: 90  tcaagtacaatgttga 75


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space:   437481
Effective search space used:   437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)