TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGGA
ATTCTGGACGAAATCCAAGACAGTCTATCAGAGGTAAAGCGGGGAGAGAG
TGTAGGAGCAAAGAGGAAACATGGTGCACCAATTAAGCATACAGGCCTTT
CCACGGGTCTTGAACCCGAGGAAAAGTTAATGTCAGGGAAGAATACCTGG
GGAGAGATTGGAAGGAAGGAGAAGGAAAAAGAAAAGAAAAAAGATCAATC
AGCGGAGGTTTCTAGGAGAAGGACCTTATATCCACCACTAGATGAGTTTA
AGCGGCTAGCTCTTAGTAGCTCAGAATCAGATGAAGGACTTAGCTCCTCT
GAAGAAACGGACTTGGAGGAGGAAGCAGTTCGTTATAAGGGAGAAAGGTA
CCAGCAAGATAAAAAGCGAGCTACTCAGTCCAGAAAAAGGCAAAAAGCGG
CTGGCAAAAGCCAGCTTGCTGCTCGGCCTCCGAACTGTCAGCTTCAGGGT
CCTAGTGCACCTCAGCCCTATGTGCAGAGGTACCATTCAGAGCCTTATGT
GCAGAGGTAGCCATTCAGAGCCTTATGTGCAGAGGTATCATTCAGATTCG
TTCATTGCAAAAGAGGAACAGAGAATAGTGCGGCAAGCATCCCCAGTTTG
TGAAGGAGCTGAGGGAGGGCATGTTCACGCTCCGGTAGAGTATGTACAGA
TTAAGGAGCTCGCAGAAGCAGTTCACAATTATGGAGTCN

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTGAAGGTTACAAAGCTAGTGAGGG
CAGAGTCAGGAATGGAGATGAATGGATGAATAAATGAACATACATATAGA
TGTTTGCTTATGTGCTCCTGGCATCTCTGCTTTTAGACAAGGAACATACT
AAGTCTTTTTTCATAGCCAGATTTTTCTTTTGAGGATGAAGATGGCCGAT
ATTCTTTTCTGCCTGGCCTTTTTTGAGTGAAGAGATTGATTTGATCTATA
GAATGTACAAGGCAAACAACTGGGATGCAGCCAGGATAGAATTGGACAGA
TGAGAGGAAAACACAGCAGAGAAAAACATATTGCGGAGTTAAGGAAATTT
CAAAATTATAGTTCAGCACCACAATAAAGGAAAAAAGATGGGGCGTGACA
CCCATATATGTGAATCATATATATATAGAGAGAGCCCTCAAATGTATACT
TAAACAGTATTTCTTTTCTCTTCTCTTCTCTTCTTTTCTTTCCTTTCCTT
TCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTT
TCCTTTCCTTTCCTTTCCTTTTCTTTTCTTTTCTCTTCTTTTGTTTTCTT
TTTTCTTTTTTTGAGTTTTCTGAGACAGGGTTTCTCTGTGTAGCCCTGGC
TGTCCTGGAACTCACTTTGGAGACCAGGCTGGCCC

Query= MSMg01no325_f04.g1 MSMg01no325_f04.g1 CHROMAT_FILE:
MSMg01no325_f04.g1 PHD_FILE: MSMg01no325_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:49 2005
         (652 letters)



>mm_chr6_35512044_35513092
          Length = 1049

 Score =  940 bits (486), Expect = 0.0
 Identities = 604/654 (92%), Gaps = 33/654 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   actgaaggttacaaagctagtgagggcagagtcaggaatggagatgaatggatgaataaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgaaggttacaaagctagtgagggcagagtcaggaatggagatgaatggatgaataaa 260

                                                                       
Query: 61  tgaacatacatatagatgtttgcttatgtgctcctggcatctctgcttttagacaaggaa 120
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaacata-atatagatgtttgcttatgtgctcctggcatctctgcttttagacaaggaa 319

                                                                       
Query: 121 catactaagtcttttttcatagccagatttttcttttgaggatgaagatggccgatattc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 catactaagtcttttttcatagccagatttttcttttgaggatgaagatggccgatattc 379

                                                                       
Query: 181 ttttctgcctggccttttttgagtgaagagattgatttgatctatagaatgtacaaggca 240
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttttctgcctggctttttttgagtgaagagattgatttgatctatagaatgtacaaggca 439

                                                                       
Query: 241 aacaactgggatgcagccaggatagaattggacagatgagaggaaaacacagcagagaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aacaactgggatgcagccaggatagaattggacagatgagaggaaaacacagcagagaaa 499

                                                                       
Query: 301 aacatattgcggagttaaggaaatttcaaaattatagttcagcaccacaataaaggaaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 500 aacatattgcggagttaaggaaatttcaaaattatagttcagcaccagaataaaggaaaa 559

                                                                       
Query: 361 aagatggggcgtgacacccatatatgtgaatcatatatatatagagagagccctcaaatg 420
           |||||||||||||||||||| ||| ||| |||||| |||||  |||||||||||||||||
Sbjct: 560 aagatggggcgtgacacccacatacgtggatcatagatata--gagagagccctcaaatg 617

                                                                       
Query: 421 tatacttaaacagtatttcttttctcttctcttctcttcttttctttcctttcctttcct 480
           ||||||||||||||||||||||||| || ||||   ||||||||||| |||| |||| ||
Sbjct: 618 tatacttaaacagtatttcttttct-tt-tctt---ttcttttcttttcttttcttttct 672

                                                                       
Query: 481 ttcctttcctttcctttcctttcctttcctttcctttcctttcctttcctttcct-ttc- 538
           || |||| |||| ||   |||  ||   |||  ||   |||  ||   |||  || ||| 
Sbjct: 673 tttcttttcttttct---ctt--ct---ctt--ct---ctt--ct---ctt--ctcttct 712

                                                                       
Query: 539 ctttccttttcttttcttttctcttcttttgttttcttttttctttttttgagttttctg 598
           |||  || |||| |||| |||||||||||  |||||||||||||||||||||||||||||
Sbjct: 713 ctt--ctcttctcttctcttctcttctttc-ttttcttttttctttttttgagttttctg 769

                                                                 
Query: 599 agacagggtttctctgtgtagccctggctgtcctggaactcactttggagacca 652
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 770 agacagggtttctctgtgtagccctggctatcctggaactcactttggagacca 823


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1049
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1039
Effective search space:   667038
Effective search space used:   667038
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)