CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAAAGAGGATCCGCGG
AATTCACCAATCTCTTTGGGCAGGTTGGCTAGCAAGTTCCCTGAAATCTG
CTTGTTACTGGTGCCCCATTGATGGGTTTACTATAATTTTAAAAACAATG
TTAAGTTCTTGAAAATGGAAATAAAATGAATTGTGACAATTTATAGGTGA
CTTTTATATCATGCATATACATGCTGATTTACTATATATAGTAAACTTAG
TATTAAAATAGAATATTTAAACAAAATCAGTGATAAGTAAGTTTCATAGT
ATAGGATTAATGAATTGGCATATGGCCATTATGGTTAATGTAGATATAAA
ATAAAAACATATGCAAATGTGATTCACATAGAAAGAGACCTTTATTCTAC
TGTGTCTCTTGAGGTGTAGAAAGTGCCTGCTTTGCAGAAAGCTCTGTGTT
CTGTTTTGGGAGAATTCACCAGTTCTTGGAAGCAGCAGAGTCAGAGCCAA
GGTGAGTTCCTTCTCTACCCTATTTTCTTCCTTCTCTTCCAGAGACAGGA
TATTGATTCCTTTGCCTGAGACCTACTTAGCTGCTATAGGCAGCTTCTCT
AGGGTTGTTGATCAGTGTGTCTTCTCCTTTGTAGGCAAGCTGGGAGGCAT
GTGACACAGCCTAAGCTATTAGGGGATTTAGGTTATGAAAACAGTAAAGG
ACATGAATATTCACCTAATTCTATAACAATAGACATAA

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGA
AGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATC
AAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAA
AAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACAC
TCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCA
GTCTGGCGGTTCCTCATAAAACTGGACATAGTACTACGGGAGGATCCAGC
AATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGG
ACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGC
TGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGAAATAGAAAATGTG
GTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTA
TGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAG
GTAACACATTCACAAAGAAACTCACACAATATGTACTCACTGATAAGTGG
ATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTAA
ACACATGANACTCAAGAAGAATGAAGACTGAAGAGTG

Query= MSMg01no325_j15.b1 MSMg01no325_j15.b1 CHROMAT_FILE:
MSMg01no325_j15.b1 PHD_FILE: MSMg01no325_j15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:08 2005
         (595 letters)



>mm_chr6_78143699_78144693
          Length = 995

 Score = 1135 bits (587), Expect = 0.0
 Identities = 593/595 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggcaggttggctagcaagttccctgaaatctgcttgttactggtgccccattgatgggtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ggcaggttggctagcaagttccctgaaatctgcttgttactggtgccccattgatgggtt 736

                                                                       
Query: 61  tactataattttaaaaacaatgttaagttcttgaaaatggaaataaaatgaattgtgaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tactataattttaaaaacaatgttaagttcttgaaaatggaaataaaatgaattgtgaca 676

                                                                       
Query: 121 atttataggtgacttttatatcatgcatatacatgctgatttactatatatagtaaactt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 atttataggtgacttttatatcatgcatatacatgctgatttactatatatagtaaactt 616

                                                                       
Query: 181 agtattaaaatagaatatttaaacaaaatcagtgataagtaagtttcatagtataggatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 agtattaaaatagaatatttaaacaaaatcagtgataagtaagtttcatagtataggatt 556

                                                                       
Query: 241 aatgaattggcatatggccattatggttaatgtagatataaaataaaaacatatgcaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 555 aatgaattggcatatggccattatggttaatgtagatataaaataaaaatatatgcaaat 496

                                                                       
Query: 301 gtgattcacatagaaagagacctttattctactgtgtctcttgaggtgtagaaagtgcct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gtgattcacatagaaagagacctttattctactgtgtctcttgaggtgtagaaagtgcct 436

                                                                       
Query: 361 gctttgcagaaagctctgtgttctgttttgggagaattcaccagttcttggaagcagcag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gctttgcagaaagctctgtgttctgttttgggagaattcaccagttcttggaagcagcag 376

                                                                       
Query: 421 agtcagagccaaggtgagttccttctctaccctattttcttccttctcttccagagacag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 agtcagagccaaggtgagttccttctctaccctattttcttccttctcttccagagacag 316

                                                                       
Query: 481 gatattgattcctttgcctgagacctacttagctgctataggcagcttctctagggttgt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gatattgattcctttgcctgagacctacttagctgctataggcagcttctctagggttgt 256

                                                                  
Query: 541 tgatcagtgtgtcttctcctttgtaggcaagctgggaggcatgtgacacagccta 595
           ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 255 tgatcagtgtgtcttctccttcgtaggcaagctgggaggcatgtgacacagccta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space:   576225
Effective search space used:   576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)