Query= MSMg01no326_e05.b1 MSMg01no326_e05.b1 CHROMAT_FILE:
MSMg01no326_e05.b1 PHD_FILE: MSMg01no326_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:57 2005
(616 letters)
>mm_chr6_33896354_33897373
Length = 1020
Score = 1050 bits (543), Expect = 0.0
Identities = 594/613 (96%), Gaps = 6/613 (0%)
Strand = Plus / Plus
Query: 5 ggaattcctttgtttcctcgtttgcaacgctttgcgttgtacgttttcatctgttgctga 64
|||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||
Sbjct: 205 ggaattcctttgtttcct-gtttgcaatgctttgtgttgtacgttttcatctgttgctga 263
Query: 65 atctctcagctatctatggtcattttaacaagtgagtttataggcatggcataaaatgct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atctctcagctatctatggtcattttaacaagtgagtttataggcatggcataaaatgct 323
Query: 125 ctgtgtgtgatcccctagtgaccacagcattctgggaatatggtctaggactctttatcg 184
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgtgcgtgatcccccagtgaccacagcattctgggaatatggtctaggactctttatcg 383
Query: 185 ccaccg---acaacaaagaacatatcctgctacagacactgactttcctagaaaaaagtt 241
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccaccgacaacaacaaagaacatatcctgctacagacactgactttcctagaaaaaagtt 443
Query: 242 aactctctgaaaggtaaggctggggattggcaatacagagatagaaacaaaagcttccta 301
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 444 aactctctgaaaggtaaggctggggattggcaatacagagatagaaacaaaggcttccta 503
Query: 302 ggtcttttgcctttgaaatcagaaaacggctccttgac--agagcatatttgaacttgct 359
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 504 ggtcttttgcctttgaaatcagaaaacggctccttgacagagagcatatttgaacttgct 563
Query: 360 gaagtctttcttcacccccacatcacctagaaagcaatatcttatgtatagaaagcaatt 419
|||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 564 gaagtctttctttataaccacatcacctcgaaagcaatatcttatgtatagaaagcaatt 623
Query: 420 ttgctctattacattaagacattaggcatgtgtggcctgtgtctgtcagcactttctcct 479
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttgctctattacattaaggcattaggcatgtgtggcctgtgtctgtcagcactttctcct 683
Query: 480 gtggctacagctgctgtcactgcccagtgactgtctcagcatctgaggctcccagcccag 539
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 684 gtggctacagctgctgtcactgcccagtgactgtctcagtgtctgaggctcccagcccag 743
Query: 540 tctcactgtttgtggctgtcatcaccatcacatacaagctgttgcccctgccaccgcctt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tctcactgtttgtggctgtcatcaccatcacatacaagctgttgcccctgccaccgcctt 803
Query: 600 cctgctgctaatg 612
|||||||||||||
Sbjct: 804 cctgctgctaatg 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1020
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1010
Effective search space: 612060
Effective search space used: 612060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_e05.g1 MSMg01no326_e05.g1 CHROMAT_FILE:
MSMg01no326_e05.g1 PHD_FILE: MSMg01no326_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:57 2005
(341 letters)
>mm_chr6_34065945_34066684
Length = 740
Score = 613 bits (317), Expect = e-180
Identities = 335/341 (98%), Gaps = 1/341 (0%)
Strand = Plus / Minus
Query: 1 aactgcactggacttcctagaatagtcttcgcatttcaggtaagacgtcttagtatctgg 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aactgtactggacttcctagaatagtcttcgcatttcaggtaagacgtcttagtatctgg 441
Query: 61 tgaggaaaacataaatttgtgagtgaaacatacaacagagtaaatttcttgatgtgacat 120
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgagaaaaacataaatttgtgaatgaaacatacaacagagtaaatttcttgatgtgacat 381
Query: 121 gacagcaatgttttatattttatttcttcaaacacaagaaattgtgtacttaaagtttgt 180
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 380 gacagcaatgttttatattttatttcttcaaacacaagaaattgtgta-tttaagtttgt 322
Query: 181 gcatttcaacttggaaataaataagatacattttacagtaacgataaaattaatgttggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatttcaacttggaaataaataagatacattttacagtaacgataaaattaatgttggc 262
Query: 241 ctatagcatccagaaggcacaaccacttggaaggtaaccagtactcagtcagcacaggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatagcatccagaaggcacaaccacttggaaggtaaccagtactcagtcagcacaggtt 202
Query: 301 tcgtattaatattaatataaagaatataataaaaacaaaca 341
| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgtattaatattaatataaagaatataataaaaacaaaca 161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 740
Length adjustment: 9
Effective length of query: 332
Effective length of database: 731
Effective search space: 242692
Effective search space used: 242692
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
