Query= MSMg01no326_e08.b1 MSMg01no326_e08.b1 CHROMAT_FILE:
MSMg01no326_e08.b1 PHD_FILE: MSMg01no326_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:57 2005
(370 letters)
>mm_chr6_15467354_15468123
Length = 770
Score = 654 bits (338), Expect = 0.0
Identities = 347/350 (99%)
Strand = Plus / Plus
Query: 21 gtcttgctcaaggacgttctaggactgttggaacactggcggaaggctttagctatgtca 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gtcttgctcaaggacgttctaggactgttggaacactggcggaaggctttagctatgtca 280
Query: 81 gaattcaatcttaaaaggcacttataataaagagagcacgtggatccatccactagacta 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gaattcaatcttaaaaggcacttataataaagagagcacgtggatccatccactagacta 340
Query: 141 gcacgggaatggaaaatttagagagcaccccagactccaggagcgagtttctgtgaaact 200
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 acacgggaatggaaaatttagagagcaccccagactccaggagcgagtttctgtgaaact 400
Query: 201 ctttttgcttcatgagcagcttttaggcagccctgcctgacaaactgactcaaccggagt 260
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 401 ctttttgcttcatgagcagcttttaggcagcccagcctgacaaactgactcaaccggagt 460
Query: 261 gccgtggcacatattccaaataattttgttttctcatatattcaactgtggaatgcatac 320
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gctgtggcacatattccaaataattttgttttctcatatattcaactgtggaatgcatac 520
Query: 321 tgtagcaaacaatgatatataaaattacagctcaagttaatattaaaaat 370
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tgtagcaaacaatgatatataaaattacagctcaagttaatattaaaaat 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_e08.g1 MSMg01no326_e08.g1 CHROMAT_FILE:
MSMg01no326_e08.g1 PHD_FILE: MSMg01no326_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:57 2005
(342 letters)
>mm_chr6_15661182_15661923
Length = 742
Score = 545 bits (282), Expect = e-159
Identities = 307/316 (97%), Gaps = 3/316 (0%)
Strand = Plus / Minus
Query: 1 agcatggtggaggcagaggtcctaatgaggcccagagtcattaaggaaggagtcgctgag 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agcatggtggaggcagaggttctaatgaggcccagagtcattaaggaaggagtcgctgag 434
Query: 61 gggagtgttctactccattgttcaggaaatcgggtcattgtttttatatttgagaaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gggagtgttctactccattgttcaggaaatcgggtcattgtttttatatttgagaaaatc 374
Query: 121 atccattggaacaaaacaaaagtttaaattaaaaacagaagtagtgcttttttccagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atccattggaacaaaacaaaagtttaaattaaaaacagaagtagtgcttttttccagatt 314
Query: 181 ttaaaagatcacaatcaccaatgttgacaattctttcttttcccaagtagagcaataaaa 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttaaaagatcaaaatcaccaatgttgacaattctttcttttcccaagtagagcaataaaa 254
Query: 241 gatgtaaacttcattcagagatcccatagcaggtgcagatgtatagagaaatcattt--t 298
|||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||| |
Sbjct: 253 gatgtaaacttcattcggagatcccatagcaggtgcacatgtatagagaaatcctttgtt 194
Query: 299 ttttgttttgtttttt 314
|||| |||| ||||||
Sbjct: 193 ttttctttt-tttttt 179
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
