Query= MSMg01no327_b09.b1 MSMg01no327_b09.b1 CHROMAT_FILE:
MSMg01no327_b09.b1 PHD_FILE: MSMg01no327_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:55 2005
(374 letters)
>mm_chr6_74268543_74269318
Length = 776
Score = 603 bits (312), Expect = e-177
Identities = 362/396 (91%), Gaps = 28/396 (7%)
Strand = Plus / Plus
Query: 3 gaattctagtttcatttacggaacttggttagtttctgtacctcatttattggtcacagg 62
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gaattctagtttcagttaaggaacttggttagtttctgtacctcatttattggtcacagg 236
Query: 63 ggagaaatgttagataagactataattccaagaaatgagtccagcatctctgaattctgc 122
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ggagaaatgttagataagaatataattccaagaaatgagtccagcatctctgaattctgc 296
Query: 123 ctgctcaagcaactgttcctccactttagcagtgggatggaatctgaaagtgtatatgtg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ctgctcaagcaactgttcctccactttagcagtgggatggaatctgaaagtgtatatgtg 356
Query: 183 tgtgtgtgtgtat--------------------------atcgaaaaaaaaaaa--gcaa 214
||||||||||| | ||||||||||||||| ||||
Sbjct: 357 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatcgaaaaaaaaaaaaagcaa 416
Query: 215 ttttcaatggtatttctgacatcatataaggaagtagtggcattggctgagaatgtatgc 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ttttcaatggtatttctgacatcatataaggaagtagtggcattggctgagaatgtatgc 476
Query: 275 aggttagtgacaaaacaaatacaaggcaatcatacttaaagcataggtgtagaggtgtca 334
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aggttagtgacacaacaaatacaaggcaatcatacttaaagcataggtgtagaggtgtca 536
Query: 335 cagggtcattctttcattcatgtctttgctttatcc 370
|||||||||||||||||||||||||| |||||||||
Sbjct: 537 cagggtcattctttcattcatgtcttggctttatcc 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 776
Length adjustment: 9
Effective length of query: 365
Effective length of database: 767
Effective search space: 279955
Effective search space used: 279955
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_b09.g1 MSMg01no327_b09.g1 CHROMAT_FILE:
MSMg01no327_b09.g1 PHD_FILE: MSMg01no327_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:55 2005
(347 letters)
>mm_chr6_74425801_74426546
Length = 746
Score = 588 bits (304), Expect = e-172
Identities = 337/354 (95%), Gaps = 11/354 (3%)
Strand = Plus / Minus
Query: 1 tgtaactaggttgtttctcattttatgagaagtgatttcctggctatattatcttcaaag 60
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgtaactaggttg-ttctcagtttatgagaagtgatttcctggctatattatcttcaaag 389
Query: 61 tttactggagatcatgaaagggaagctcatgtatttcagataatgggaggtcaaaggtgt 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 388 tttactggagatcatgaaagggaatctcatgtatttcagataatgggaggtcaaaggtgt 329
Query: 121 ggtcttacctgttgtacactgcagtcctgaaatttattccccaaacaaaacaaaaacaag 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 328 ggtcttacctgttgtacactgcagtcctgaagtttattccccaaacaaaacaaaaacaag 269
Query: 181 tcaaccaacaaactaagcactctatgagtgaatctgctatctttttactgtgctgtgaat 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tcaacccacaaactaagcactctatgagtgaatctgctatctttttactgtgctgtgaat 209
Query: 241 atataggttttgtttgtttgtttgtttgtt----------ttctttcagaaacaaacctg 290
|||||||||||||||||||||||||||||| || ||||||||||||| |||
Sbjct: 208 atataggttttgtttgtttgtttgtttgtttgtttgtttattttttcagaaacaaaactg 149
Query: 291 aagggttttagtaggtttcaaagaatggaagtttttgaaaattggaaaaataaa 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 aagggttttagtaggtttcaaagaatggaagtttttgaaaattggaaaaataaa 95
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 746
Length adjustment: 9
Effective length of query: 338
Effective length of database: 737
Effective search space: 249106
Effective search space used: 249106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
