TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGTAAGACCGTTACCTATTCAGTAACATTCAAGTTCACTTCTAGTA
GAGACAGTGAAATGATTAGGCATTACAAAGAACAGAGCTAGAAAAGCTCA
GGGCTAGTCTACATAGTAAGTCCTTAGGACAATAGCTGAGTCACACCCAA
ACACAGGAATACACAATGGCCTAGCAAATAGGTGAGTTGATCATGAAAAA
GTTAGTGGAAGAGAATTCCCCTGGTAGAGGTTTCTTCACTAGGCCCAGAG
GAATAGCATAATCATGTATTTACTAAAGAACCCCTGGTGGTGGGTTTAGC
ATTGGATCAGAGACTAGCATTGCATCAGAGCATTCACCTGGCTCCATTTT
AAGTGGCAAATGTGACCTGGTCCCCTTTTTTTTTTTTGGTGTATGCATTC
TTTTTGTTTTGTGTCACTGTAATTTGGTGGATGTGTTCTCCTGGTTTTTT
GTTTTTCTTCTGTATAAAAAAGTCTGGTGTCCGTTTGGACAGTACATTCA
GATTCAGCACTCTCTCGTGCCTGTGTCTGTCTGCCAGTTCTCACTGACTC
TATGCCCATCTGTCCGAGACCCCAATTCCTACTGATTGAGGGTGGTCGAC
TGTTTCCTTTCTGTGCGCGATTCTTATCCCTCCACTTTACACATTTACCT
TGTTGACTGATCCTTCTTTGTGTACCAGTAN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCCATGAAGAATGTGTTAGGAGAG
ACATGACCATGGAGGAAGAACACCTGAAGCCCACAGATCCAGTCCAATAC
TGAAATGCAAGCATCTGGGAATTTTGGCTGGAAGGTTGCCAGATTATTTT
AAAGGATTAGAATAGATCATGACTTTCCAGTTATTGTAAGCTAATGAAAT
GAATCTTAGTCTCAGTCTTATTCATTTGAGAATAGCCAGAGATAGAGAAA
AACTGTCTTTTTAAAAATTACTTTTTATACTCTCACCCTGTATGAAGTGA
GTTCCTCTAAATATAAGCTATCATGGATGGTTTGCATTAAATATGAATTC
GTTTTTTTTTTCTGCTTTTCTTTTTTATAAAGGTATGAGTAGGTGTGTAT
GCATGAATGCATGCATGCATGTGTCTGTGTCTATGTGTTTGGAGGAGCAA
TGTTGAACAGATTATCATTCTGAATACTTGACTGGATTGGTATTCTCTTG
GTATCCTATGATTGCCTCAAAGTGAAGGATGTTTACATTTGCGGATGAAG
CCTGCCATAATCATGCCTGTCTAGCATTAAAAGGTTAAGTTTCATATGGC
AAAACCCGATATCTACACTTTTCCGCCTTGCACACTTTATACTCCGGCGA
TACTACCTGCCATGTTCCTTTTACCCTCCTCTTCACA

Query= MSMg01no329_c12.g1 MSMg01no329_c12.g1 CHROMAT_FILE:
MSMg01no329_c12.g1 PHD_FILE: MSMg01no329_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:31 2005
         (492 letters)



>mm_chr6_110073416_110074304
          Length = 889

 Score =  853 bits (441), Expect = 0.0
 Identities = 480/497 (96%), Gaps = 8/497 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tccatgaagaatgtgttaggagagacatgaccatggaggaagaacacctgaagcccacag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 tccatgaagaatgtgttaggagagacatgaccatggaggaagaacacctgaagcccacag 757

                                                                       
Query: 61  atccagtccaatactgaaatgcaagcatctgggaattttggctggaaggttgccagatta 120
           |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 756 atccagtccaatactgaaatgcaagcatatgggaattttggctggaaggtagccagatta 697

                                                                       
Query: 121 ttttaaaggattagaatagatcatgactttccagtta-----ttgtaagctaatgaaatg 175
           |||||||||||||||||||||||||||||||||||||     ||||||||||||||||||
Sbjct: 696 ttttaaaggattagaatagatcatgactttccagttattgtgttgtaagctaatgaaatg 637

                                                                       
Query: 176 aatcttagtctcagtcttattcatttgagaatagccagagatagagaaaaactgtctttt 235
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aatcttagtctcagtcttattcatttgagaatagccagagatagagaaaaactgtctttt 577

                                                                       
Query: 236 taaaaattactttttatactctcaccctgtatgaagtgagttcctctaaatataagctat 295
           |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 576 taaaaattacttttgatactctcaccctgtatgaagtgagttcctctaaatattagctat 517

                                                                       
Query: 296 catggatggtttgcattaaatatgaattcgttttttttttctgcttttcttttttataaa 355
           ||||||||||||||||||||||||||||||   |||||||||| ||||||||||||||||
Sbjct: 516 catggatggtttgcattaaatatgaattcg---tttttttctgtttttcttttttataaa 460

                                                                       
Query: 356 ggtatgagtaggtgtgtatgcatgaatgcatgcatgcatgtgtctgtgtctatgtgtttg 415
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ggtgtgagtaggtgtgtatgcatgaatgcatgcatgcatgtgtctgtgtctatgtgtttg 400

                                                                       
Query: 416 gaggagcaatgttgaacagattatcattctgaatacttgactggattggtattctcttgg 475
           |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 399 gaggagcaatgttgaatagattatcattctgaatacttgactggattggtgttctcttgg 340

                            
Query: 476 tatcctatgattgcctc 492
           |||||||||||| ||||
Sbjct: 339 tatcctatgattacctc 323


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 889
Length adjustment: 10
Effective length of query: 482
Effective length of database: 879
Effective search space:   423678
Effective search space used:   423678
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)