Query= MSMg01no329_o09.b1 MSMg01no329_o09.b1 CHROMAT_FILE:
MSMg01no329_o09.b1 PHD_FILE: MSMg01no329_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:31 2005
(540 letters)
>mm_chr6_77385671_77386610
Length = 940
Score = 965 bits (499), Expect = 0.0
Identities = 526/535 (98%), Gaps = 2/535 (0%)
Strand = Plus / Plus
Query: 4 ggaattctagtggccttcaacataattattataagtatgtttaatcaaacttttgaagct 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctagtggcctttaacataattattataagtatgtttaatcaaacttttgaagct 263
Query: 64 acttgcaacctaatggtgaagttcagatgacatttttcattcatatgttaatatcacttc 123
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 264 acttgcaacctaatggtgaagttcagatgagatttttcattcatatgttaatatcacttc 323
Query: 124 agatgtccaggaacatatgaaacatagcaaattttaaaacaaacaccaacactggggtta 183
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 324 agatgtccaggaacatatgaaacatagcaaattttaaaaccaacaccaacactggggtta 383
Query: 184 cgaatctggggccagacaggtcatagcccataggggagaaccaactacaattattagtct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cgaatctggggccagacaggtcatagcccataggggagaaccaactacaattattagtct 443
Query: 244 gatattacatgttattaaaagattagtgacattattatactcgtagattaggggatttcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gatattacatgttattaaaagattagtgacattattatactcgtagattaggggatttcc 503
Query: 304 ctggtttcattgaagaagcttccttttgctgtagctagtcattatcacagagaataagag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 504 ctggtttcattgaagaagcttccttttgctgtagctagtcattatcacagagaatgagag 563
Query: 364 tttgagggacgccaagcgtaaatggaatacctctaccacacccccttatcacaaggctca 423
||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttgagggatgctaagcataaatggaatacctctaccacacccccttatcacaaggctca 623
Query: 424 gagagccattgcagaagaggaca-cagaaagattttgagagccagatgagctggatggct 482
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 624 gagagccattgcagaagagga-agcagaaagattttgagagccagatgagctggatggct 682
Query: 483 gcaaggaaatagtggtctccagtcacagaaaggccatcgtacatatgaattcaca 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gcaaggaaatagtggtctccagtcacagaaaggccatcgtacatatgaattcaca 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space: 492900
Effective search space used: 492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_o09.g1 MSMg01no329_o09.g1 CHROMAT_FILE:
MSMg01no329_o09.g1 PHD_FILE: MSMg01no329_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:31 2005
(341 letters)
>mm_chr6_77601135_77601875
Length = 741
Score = 650 bits (336), Expect = 0.0
Identities = 339/340 (99%)
Strand = Plus / Minus
Query: 1 aaactaacgtggtttaggccaagagtgttctttcagctcgatgtctttttggcaggaatg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aaactaacgtgttttaggccaagagtgttctttcagctcgatgtctttttggcaggaatg 481
Query: 61 ttgctttcttctccttggggaggtccctggggctttcctaggctgcagtgctggctggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ttgctttcttctccttggggaggtccctggggctttcctaggctgcagtgctggctggct 421
Query: 121 ctagccaacctctttctgcttaatgcatcttttgtaatactagtaattgcactcaactat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ctagccaacctctttctgcttaatgcatcttttgtaatactagtaattgcactcaactat 361
Query: 181 actggagaaaaaagttttaagatctttacatgttactcagacattaaaggcaacatttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 actggagaaaaaagttttaagatctttacatgttactcagacattaaaggcaacatttga 301
Query: 241 tggaaagtatttttttctctaggaagtccttttgaacagtgggccaatgggactgaccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tggaaagtatttttttctctaggaagtccttttgaacagtgggccaatgggactgaccct 241
Query: 301 aaattaacaatgaatcccctttttttattgtaagcaatga 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aaattaacaatgaatcccctttttttattgtaagcaatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
