Query= MSMg01no330_e05.b1 MSMg01no330_e05.b1 CHROMAT_FILE:
MSMg01no330_e05.b1 PHD_FILE: MSMg01no330_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:56 2005
(294 letters)
>mm_chr6_112193980_112194672
Length = 693
Score = 514 bits (266), Expect = e-150
Identities = 287/294 (97%), Gaps = 1/294 (0%)
Strand = Plus / Plus
Query: 1 caaagcaaggccatcaccccagcatagaaaggaagatggtaatcatggtctctcaccccc 60
||||||||||||||||||||| |||||||||||||||||||||||||| |||| | ||
Sbjct: 201 caaagcaaggccatcaccccaacatagaaaggaagatggtaatcatgg-ctctgaaagcc 259
Query: 61 agctttataaaacgcttgccctgtcctgggcttttgaacttttggtgctattgacattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agctttataaaacgcttgccctgtcctgggcttttgaacttttggtgctattgacattga 319
Query: 121 aacctaattgtattgaccttggtatccaaggtaaacaagctgtgtggaggaaatgtttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aacctaattgtattgaccttggtatccaaggtaaacaagctgtgtggaggaaatgtttgg 379
Query: 181 acccgaagattcctgtttgtttccagtctgtcctaatggccggaatcctgaatggctcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acccgaagattcctgtttgtttccagtctgtcctaatggccggaatcctgaatggctcca 439
Query: 241 ttctctgccttttacagtgctcttcacatgcagtaaagtgaagagtcccaaact 294
||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 440 ttctctgccttttacagtgctcttcacatgcagtaaaatgaagagtcccaaact 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 693
Length adjustment: 9
Effective length of query: 285
Effective length of database: 684
Effective search space: 194940
Effective search space used: 194940
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no330_e05.g1 MSMg01no330_e05.g1 CHROMAT_FILE:
MSMg01no330_e05.g1 PHD_FILE: MSMg01no330_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:56 2005
(283 letters)
>mm_chr6_112355420_112356102
Length = 683
Score = 451 bits (233), Expect = e-131
Identities = 269/281 (95%)
Strand = Plus / Minus
Query: 1 ggctgcctctgagcagaggttaagccctccccagtctgtgctcaacccacacctccttct 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 481 ggctgcctctgagcagaggttaagccctccccggtctgtgctcaacccacacctccttct 422
Query: 61 ttgtcgctccacatgcagagtacttgctatgtccctgctcaagttactcgcaggggtgaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctgtcgctccacatgcagagtacttgctatgtccctgctcaagttactcgcaggggtgaa 362
Query: 121 cacagcacacctccctgaccacctcagcataatggcttcttccgtcatgaggaacaaccg 180
|| || |||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 361 caaagtacacgtccctgaccacctcagcataatggcttcttccgtcatgaagaacaaccg 302
Query: 181 tgacactgtgggtggcatcagccttgggaaggcagaccccagaaaggatttccgcagggt 240
||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 301 tgacagtgtgaatggcatcagccttgggaaggcagaccccagaaaggatttccccagggt 242
Query: 241 accttgcattctcagtgttgatgctgggtttcaggagggca 281
||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 241 accttccattctcagtgttgttgctgggtttcaggagggca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
