Query= MSMg01no330_f05.b1 MSMg01no330_f05.b1 CHROMAT_FILE:
MSMg01no330_f05.b1 PHD_FILE: MSMg01no330_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:01 2005
(324 letters)
>mm_chr6_107191840_107192563
Length = 724
Score = 603 bits (312), Expect = e-177
Identities = 315/316 (99%)
Strand = Plus / Minus
Query: 8 ttctttctctccatcccagcagatatgtccctatgccatttcttctccctggatttcagt 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ttctttctctccatcccagcagatatgtccctatgccatttcttctccctggatttcagt 464
Query: 68 ttccaaggtcagagtcaagccatgcatcttctaaggtctcttctatacctcacgtgaagt 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ttccaaggtcagagtcaagccatgcatcttctaaggtctcttctatacctcacgtgaagt 404
Query: 128 gataattaccctattctcatccaggagtcaagaattattaaatgtatttcacacttgaga 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 403 gataattaccctattctcatccaggagtcaagaattattaaatgtatttcacactcgaga 344
Query: 188 cacttctacataaaatcacccaattatttaaaactgtgatctgggattttgttactctga 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cacttctacataaaatcacccaattatttaaaactgtgatctgggattttgttactctga 284
Query: 248 tataagtatactgtacagggctttaaggcaaactcctccatcttcaggagttcagcagtg 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tataagtatactgtacagggctttaaggcaaactcctccatcttcaggagttcagcagtg 224
Query: 308 tctgtttggaaaagat 323
||||||||||||||||
Sbjct: 223 tctgtttggaaaagat 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_f05.g1 MSMg01no330_f05.g1 CHROMAT_FILE:
MSMg01no330_f05.g1 PHD_FILE: MSMg01no330_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:01 2005
(291 letters)
>mm_chr6_107032953_107033643
Length = 691
Score = 518 bits (268), Expect = e-151
Identities = 286/292 (97%), Gaps = 2/292 (0%)
Strand = Plus / Plus
Query: 1 aatcatcccaggcctctaggagagtagattgataagactctggatctctgaccaaacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 201 aatcatcccaggcctctaggagagtagattgataagactctggatctcttagcaaacaag 260
Query: 61 catggaagggcaatcacctcctatttgatatctcttgagtgctagtgtcagtgttcagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catggaagggcaatcacctcctatttgatatctcttgagtgctagtgtcagtgttcagtt 320
Query: 121 tccagagaaagaggaatgaacaaactgactaatgtgatggggtattcaactctgtctggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccagagaaagaggaatgaacaaactgactaatgtgatggggtattcaactctgtctggc 380
Query: 181 tctagga-cagtggttctcaacccatgggttgtgacccctttgggggttaatcctatata 239
||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 tctag-atcagtggttctcaacccaagggttgtgacccctttgggggttaatcctatata 439
Query: 240 tcagatatttacattacaattcattaaagtagcaaaattacagttataaagt 291
|||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 440 tcagatatttacattacaattcataaaagtagcaaaattacagttataaagt 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
