Query= MSMg01no330_g04.b1 MSMg01no330_g04.b1 CHROMAT_FILE:
MSMg01no330_g04.b1 PHD_FILE: MSMg01no330_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:05 2005
(314 letters)
>mm_chr6_68681958_68682674
Length = 717
Score = 509 bits (263), Expect = e-148
Identities = 300/313 (95%), Gaps = 5/313 (1%)
Strand = Plus / Plus
Query: 6 aattctgtcacct-acctgaactgaaaaggaatgtcaacaattatgctctgtgaaggaat 64
||||||||||| | |||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 206 aattctgtcac-tgacctgaactgaaaaggaatgtcaacaattatgatctgttaaggaat 264
Query: 65 catttgtttttctcttggtgtcacagtatattttttgtcactaaaggtatgtgttaggta 124
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 265 catttgtttttctcttggtatcacagtacattttttgtcactaaaggtatgtgttaggta 324
Query: 125 tatt-gtttcacagaaaaatagtcaagggaaagaccattgtccttgatcataattggatt 183
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatttgtttcacagaaaaatagtcaagggaaagaccattgtccttgatcataattggatt 384
Query: 184 gtgggaaactggcaattaaaaggattccactaaaatttatttttcaacttaaaaaaa--t 241
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 385 gtgggaaactggcaatcaaaaagattccactaaaatttatttttcaacttaaaaaaaaat 444
Query: 242 agttctgctgatctagcttgttgctttttttatttatgctacttatgatgaaagctgaga 301
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 agttctgctgatctagcttgttgctttccttatttatgctacttatgatgaaagctgaga 504
Query: 302 agactctaaaagg 314
|||||||||||||
Sbjct: 505 agactctaaaagg 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 717
Length adjustment: 9
Effective length of query: 305
Effective length of database: 708
Effective search space: 215940
Effective search space used: 215940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_g04.g1 MSMg01no330_g04.g1 CHROMAT_FILE:
MSMg01no330_g04.g1 PHD_FILE: MSMg01no330_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:05 2005
(227 letters)
>mm_chr6_68880513_68881139
Length = 627
Score = 416 bits (215), Expect = e-121
Identities = 224/227 (98%)
Strand = Plus / Plus
Query: 1 gagaaggaaacttcatgtttctgctgtgacctgacattgattcttgcactggatgtggcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 201 gagaaggaaacttcatgtttctgctgtgacctgacattgattcttgcactggatttgtcc 260
Query: 61 agactaataagaagttctaattaatttcaatgtctacatgcaaatcaactaggcctggac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 agactaataagaagttctaattaatttcaatgtctacatgcaaatcaactaggcctagac 320
Query: 121 tgaggttatctcagtaactcaactgggtgtgtccaggtgtcccaaatcagaccagaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaggttatctcagtaactcaactgggtgtgtccaggtgtcccaaatcagaccagaatat 380
Query: 181 tgcatcctttgctactggcaatggtgtattttcttacaaaatatatg 227
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcatcctttgctactggcaatggtgtattttcttacaaaatatatg 427
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 627
Length adjustment: 9
Effective length of query: 218
Effective length of database: 618
Effective search space: 134724
Effective search space used: 134724
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
