Query= MSMg01no331_p02.b1 MSMg01no331_p02.b1 CHROMAT_FILE:
MSMg01no331_p02.b1 PHD_FILE: MSMg01no331_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:56 2005
(427 letters)
>mm_chr6_38334404_38335230
Length = 827
Score = 772 bits (399), Expect = 0.0
Identities = 420/427 (98%)
Strand = Plus / Plus
Query: 1 gttttcaagatttatttattttatgtgagtacactgtcaccgtcttcagacataccccag 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 gttttcaagatttatttattttatgtgagtacactgtcactgtcttcagacataccccag 260
Query: 61 aagagggtgtcagatcccattacagatggttgtgagccaccatgtggttgctgggaattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagagggtgtcagatcccattacagatggttgtgagccaccatgtggttgctgggaattg 320
Query: 121 aactcaggacctctggaagagcagtcagtgctcttaaccactgagccatctctccagccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactcaggacctctggaagagcagtcagtgctcttaaccactgagccatctctccagccc 380
Query: 181 cctaagtttttataatggacacaataggctgtcttctggacatctttagctcttctagtc 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctaagtttttataatggacataataggctgtcttctggacatctttagctcttctagtc 440
Query: 241 tataagctatcctgactaggctaacagaatgctttcatggcctgtcttcatagaaggttt 300
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 tataagctagcctgactaggctaacagaatgctttcatggcctgtcttcagagaaggttt 500
Query: 301 atgaattgttaatactgtgttgtgtgcacatgtgaacagaataacacggaagtgtgggat 360
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 501 atgaattgttaatactgtgttgtgtgcacatgtgaacagaataagatggaagtgtgggat 560
Query: 361 tggatgcagcagagcccagtggtgggagcctgggctttggaggcagacataaatttaagt 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 tggatgcagcagagcccagtggtgggagcctgggctttggaggcagacatgaatttaagt 620
Query: 421 cccatta 427
|||||||
Sbjct: 621 cccatta 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_p02.g1 MSMg01no331_p02.g1 CHROMAT_FILE:
MSMg01no331_p02.g1 PHD_FILE: MSMg01no331_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:56 2005
(434 letters)
>mm_chr6_38520633_38521467
Length = 835
Score = 833 bits (431), Expect = 0.0
Identities = 434/435 (99%), Gaps = 1/435 (0%)
Strand = Plus / Minus
Query: 1 tccacatttaggccaccacaccagatttaggacacagtttcaactgtgtttcctattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tccacatttaggccaccacaccagatttaggacacagtttcaactgtgtttcctattaaa 576
Query: 61 aatgacaaagatgcttcctattccatgtgtcttgatacttttatgcttaggagatatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aatgacaaagatgcttcctattccatgtgtcttgatacttttatgcttaggagatatctt 516
Query: 121 taatttcacttaaaaaat-aaaaaacactcatttgggcatctgtggtcggggtactcact 179
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 taatttcacttaaaaaataaaaaaacactcatttgggcatctgtggtcggggtactcact 456
Query: 180 gcttatgaaaagtaatctggaaatcttttcttcattccagatatttctggcaaatgagaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gcttatgaaaagtaatctggaaatcttttcttcattccagatatttctggcaaatgagaa 396
Query: 240 ataaaaccagggtcaagatttatcccctaacaattccccatcagcaagtgtatctgtgaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ataaaaccagggtcaagatttatcccctaacaattccccatcagcaagtgtatctgtgaa 336
Query: 300 gggaagttactcataatttcaatcaatcaaattataaagttaaaagatctatgccattta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gggaagttactcataatttcaatcaatcaaattataaagttaaaagatctatgccattta 276
Query: 360 aaaataaaggataggggacagtgaccctgtgagaacatgcccctggcaaaatatttcttt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaataaaggataggggacagtgaccctgtgagaacatgcccctggcaaaatatttcttt 216
Query: 420 catccctctccagaa 434
|||||||||||||||
Sbjct: 215 catccctctccagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 835
Length adjustment: 9
Effective length of query: 425
Effective length of database: 826
Effective search space: 351050
Effective search space used: 351050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
