TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCCCTTGTCTCGGATGAGACTTTGCAGAAATGCTCTGCAGTTTGCA
GCCCAGGCAGCCCAATCCCTCCCCCTTCTTGACCCTCAATTACAAGTGTA
TCATATTCACTGTGGTCTAAACTATCTCCCACCTAACTCACTCCTCGACT
TTACTCAGATCTAAACTTCCCTGAAATACTCTGTAGATTCCAGTTTACTT
ACTTTCATGTTTTATTGCCAATAAAACCTTAATAAATAATTTCTGGTAAT
CATTTACTTATCTCAAATCACTTGAACGAAATATGGTCCTGGATACAAAC
CATGGTGTGTCTATCATTTACCACAGAATAATCAATTTGAGTCATCACAC
AGGGACTACAAATGAGACCCAAACATGGCCAGAAAAAGGATGGACAGTAG
TTGCACCTTTTATCATATAAATATAGTTTATTTTTCCCTAAACATTTTGA
TCAGATTTGGAATTCATTCTAAATAAATGACTAAAAATATTTTCAATGCT
GCTGTTGGCGTTGGTGCCTTATGGCTTTTAAAGTCGTGAGAGAGCTGTAG
TAAAAATCTATCTTTTGCACTGTTAACATATTATTGTACTCTAGGATTTA
TAATCTCTTTCTTATATTATGGGCCTACTGTGCCTTTTAACCAGTTGTTA
AGAACTTCAGTATCAATA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGTAGGCTTCTTGTATGATCATGGGC
ATCTCTTTCTTTATGTTTGGGAAGTTTTCTTCTACTATTTTGTTGAAGAT
ATTAGCTGGCCCTTTAAGTTGAAAATCTTCATTCTCATCAATTCCTATTA
TCCGTAGGTTTGCACTTCTCATTGTGTCCTGGATTTCCTGGATGTTTTGA
GTTAGGATCCTTTTGCATTTTGTATTTTCTTTGACTGTTGTGTCGATGTT
CTCTATGGAATCTTCTGCACCTGAGATTCTCTCTTCTATTTCTTGTATTC
TGTTGCTGATGCTCGCATCTATGGTTCCAGATCTCTTTCCTAGGGTTTCT
ATCTCCAGCTTTGCCTCACCCCGGGTTTTCTTTATTGTGGCTACTTCCCT
TTTTAGTTCTAGTATGGTTTTGTTCATTTCCATCACCTGTTTGGATGTGT
TTTCCTGTTTTTCTTTAAGGACTTCTACCTGTTTGGTTGTGTTTTCCTGC
TTTTCTTTAAGGGCCTGTAACTCTTTAGCAGTGCTCTCCTGTAATTCTTT
AAGTGACTTATGAAAGTCCTTCTTGATGTCCTCTATCATCATCATGAGAA
ATGTTTTTAAGTCTGGGTCTAGATTTTCGGTTGTGTTGGGGTGCCCAGGA
CTAGGTGGGGTGTGAGTGCTGCGTTCT

Query= MSMg01no333_m17.b1 MSMg01no333_m17.b1 CHROMAT_FILE:
MSMg01no333_m17.b1 PHD_FILE: MSMg01no333_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:03 2005
         (648 letters)



>mm_chr6_14548372_14549419
          Length = 1048

 Score = 1114 bits (576), Expect = 0.0
 Identities = 630/648 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   agactttgcagaaatgctctgcagtttgcagcccaggcagcccaatccctcccccttctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 agactttgcagaaatgctctgcagtttgcagcccaggcagcccaatccctcccccttctt 789

                                                                       
Query: 61  gaccctcaattacaagtgtatcatattcactgtggtctaaactatctcccacctaactca 120
           |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 788 gaccctcaattacaagtgtatcatattcactgtggtctgaactatcgcccacctaactca 729

                                                                       
Query: 121 ctcctcgactttactcagatctaaacttccctgaaatactctgtagattccagtttactt 180
           ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 728 ctcctcgactttactcagatctaagtttccctgaaatactctgtagattccagtttactt 669

                                                                       
Query: 181 actttcatgttttattgccaataaaaccttaataaataatttctggtaatcatttactta 240
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 actttcatgttttatcgtcaataaaaccttaataaataatttctggtaatcatttactta 609

                                                                       
Query: 241 tctcaaatcacttgaacgaaatatggtcctggatacaaaccatggtgtgtctatcattta 300
           |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 608 tctcaaatcacttgaatgaaatatggtcttggatacaaaccatggtgtgtctatcattta 549

                                                                       
Query: 301 ccacagaataatcaatttgagtcatcacacagggactacaaatgagacccaaacatggcc 360
           ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 548 ccacagaataatcaatttgagtcatcacacaggcactacaaatgagacccaaacatggtc 489

                                                                       
Query: 361 agaaaaaggatggacagtagttgcaccttttatcatataaatatagtttatttttcccta 420
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 488 agaaaaaggatggacagtagttgcaccttttctcatataaatatagtttatttttcccta 429

                                                                       
Query: 421 aacattttgatcagatttggaattcattctaaataaatgactaaaaatattttcaatgct 480
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 428 aacattttgatcagatttggaatttattctaaataaatgactaaaaatattttcaatgct 369

                                                                       
Query: 481 gctgttggcgttggtgccttatggcttttaaagtcgtgagagagctgtagtaaaaatcta 540
           ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 368 gctgttggcattggtgccttatggcttttacagtcgtgagagagctgtagtaaaaatcta 309

                                                                       
Query: 541 tcttttgcactgttaacatattattgtactctaggatttataatctctttcttatattat 600
           |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 308 tcttttgcactgctaacatattattgtactctaggatttataatatctttcttatattat 249

                                                           
Query: 601 gggcctactgtgccttttaaccagttgttaagaacttcagtatcaata 648
           |||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 248 gggcctactgtgacttttaaccagttgttaagagcttcagtatcaata 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)