Query= MSMg01no334_c05.b1 MSMg01no334_c05.b1 CHROMAT_FILE:
MSMg01no334_c05.b1 PHD_FILE: MSMg01no334_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:28 2005
(309 letters)
>mm_chr6_82982819_82983527
Length = 709
Score = 590 bits (305), Expect = e-173
Identities = 308/309 (99%)
Strand = Plus / Plus
Query: 1 aggactggctgggtaaagcacagcccaagttttcctccacctctgggaaagaacgaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggactggctgggtaaagcacagcccaagttttcctccacctctgggaaagaacgaaaga 260
Query: 61 ctcgagagtgcgcggtggtagcacgcgccccacaaggaagaagagacccatgaaggccga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcgagagtgcgcggtggtagcacgcgccccacaaggaagaagagacccatgaaggccga 320
Query: 121 tctgagtctggggcttcccaggctgagctactttcccaaagataatggcatcccaagtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 tctgagtctggggcttcccaggctgagctactttcccaaagataatggcatcccaagacc 380
Query: 181 gcaccaaggagggcacagcccgagacttttaagggaacgtcttggggatctacaattgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcaccaaggagggcacagcccgagacttttaagggaacgtcttggggatctacaattgcc 440
Query: 241 cgcgcgccgttccgaccttcttccggccccttccctctttctggattctttcacccactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgcgcgccgttccgaccttcttccggccccttccctctttctggattctttcacccactt 500
Query: 301 ctagtccag 309
|||||||||
Sbjct: 501 ctagtccag 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_c05.g1 MSMg01no334_c05.g1 CHROMAT_FILE:
MSMg01no334_c05.g1 PHD_FILE: MSMg01no334_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:28 2005
(248 letters)
>mm_chr6_83150022_83150665
Length = 644
Score = 453 bits (234), Expect = e-132
Identities = 243/248 (97%), Gaps = 4/248 (1%)
Strand = Plus / Minus
Query: 1 agcagcagctcccgtgacactgattggatggagtgagctttagcacgggctttgtcacca 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 444 agcagcagctcccgtgacactgattagatggagtgagctttagcacgggctttgtcacca 385
Query: 61 tttcttactgctctgctgcctcagtttccctgagctcccagcctgatgggaagacgatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttcttactgctctgctgcctcagtttccctgagctcccagcctgatgggaagacgatgg 325
Query: 121 ccagtgcatcagaaagccagcgccacatgagcttccagtctctgccctccaagcttccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccagtgcatcagaaagccagcgccacatgagcttccagtctctgccctccaagcttccca 265
Query: 181 cgtggaccctgagtgccaccaggctcccttccctccctctctgctcagagcagctcagcg 240
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 264 cgtggaccctgagtgccaccaggctccct----tccctctctgctcagagcagctcagcg 209
Query: 241 cacacaga 248
||||||||
Sbjct: 208 cacacaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 644
Length adjustment: 9
Effective length of query: 239
Effective length of database: 635
Effective search space: 151765
Effective search space used: 151765
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
