TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCCAGATACGCGG
AATTCATTAAATACTTTGACAAATGAATGGATATAGAGGATATCATCCTG
AGTGAGGTAACCCAATCACAAAAGAACACACACATATGCACTCAATGATA
AGTGGATATTAACCCAGAAGCTCTGAATACCCAAGATACAGTTTACAAAC
AACATGAAACTCAAGAAGGAAGACCAAAGTATGAATACTTAGGTCCTTCT
TAGAAGGGGGAACAAATTGTCCATGGAAGGAGTTAAAGAGACAAAGCATG
GAGCAGAGACTGAATAATTGATCATATATATTCTGCCCCAACTGGGGATT
TATCCCATGTATAATCACCAAACCACATACTATTGTGGATGCCAATAAGT
GCTTGCTGACAGGAGCCTGATATAGCTATCCCCTGAAAGGTTCTGCCAGT
GCCTGACAAATACAGAGGTGGGTGCGCACAGCCAACCATTGTATTGAGCA
CAAGGTCCCCAATGGAGGAGCTAGAGAAAGGACTGAAGAGGATTGCAGCC
CCATTAGGAAGAGTAACAATATAAACTAACCAGTGTCTCCAGAGCTCCCA
GGGACTAAACTACCAACCATAGAGTACACATGTTGGGACTCATGGCTCCA
GCTACACATGTAGAATAGGATGATCCTGTTAGTCATCAGTGGGAAGAGAT
GCCCTTGGTCTTGTGAAGGCTCTGTGCTCCAGTATAGGGGAATTCCAGAG
CCAGAAGT

CCATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTGTTTTTACCTCCCACACTAGATAAC
AGGTGGGCCACATACCTGTTTAGAATATACTTGGAATTCTGTGCCTTCAT
GTCTGGTCTTCATTCTGTACAACAATCACTTTAGCCATTGAGCTGTCTTT
CCAGACTTACTTTTTGTTTTATTCTTTTTGGACAGTATCTTATCCTTTAG
CCCAGGGTGGTCTAAATTCAATCCACTGACTTTGTATGGACCATGAAGTC
ATTTCCACCTTGCCTACTGTGGAGAGTTTTGCCATGGACATAGGAATACA
GATTTCTGTTTGACATATTGATTTATTCTAGTTAGAATATCAAAACAGGA
TTCTTGGGTCTATCATTTTAAATTGGTTGAGAAAACTACATACTGTTTTG
TGTATGGGTAATTTATAGTTCAAATGATATTCTACAATGGGCCCTATTTT
TATTTATTACTAATATATGTGCAATGCGAAAAATAATAGGACACATTTTT
GTGCCTATGGGTAATGTACTTTGATCATATTCACCCTTCTTTCTGACCTT
TCTCATGTTTCCTTATAGGTTCACCAGAGCAGGTTATTTTAGATTTTGAG
ATAAGTGCCATTCTTGCTTCGTTCAGTTGATGCCCAGCCTTTGTTTTGAC
CTGCCTCTTGTTGCACTCTTTTTCTTGTTGAGCTCTTTAACCCTCATATA
TTT

Query= MSMg01no334_d24.g1 MSMg01no334_d24.g1 CHROMAT_FILE:
MSMg01no334_d24.g1 PHD_FILE: MSMg01no334_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:37 2005
         (547 letters)



>mm_chr6_102795078_102796024
          Length = 947

 Score = 1004 bits (519), Expect = 0.0
 Identities = 540/547 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgtttttacctcccacactagataacaggtgggccacatacctgtttagaatatacttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtttttacctcccacactagataacaggtgggccacatacctgtttagaatatacttg 260

                                                                       
Query: 61  gaattctgtgccttcatgtctggtcttcattctgtacaacaatcactttagccattgagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaattctgtgccttcatgtctggtcttcattctgtacaacaatcactttagccattgagc 320

                                                                       
Query: 121 tgtctttccagacttactttttgttttattctttttggacagtatcttatcctttagccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtctttccagacttactttttgttttattctttttggacagtatcttatcctttagccc 380

                                                                       
Query: 181 agggtggtctaaattcaatccactgactttgtatggaccatgaagtcatttccaccttgc 240
           ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 agggtggtccaaattcaatccactgactttctatggaccatgaagtcatttccaccttgc 440

                                                                       
Query: 241 ctactgtggagagttttgccatggacataggaatacagatttctgtttgacatattgatt 300
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctactgtggagagcattgccatggacataggaatacagatttctgtttgacatattgatt 500

                                                                       
Query: 301 tattctagttagaatatcaaaacaggattcttgggtctatcattttaaattggttgagaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattctagttagaatatcaaaacaggattcttgggtctatcattttaaattggttgagaa 560

                                                                       
Query: 361 aactacatactgttttgtgtatgggtaatttatagttcaaatgatattctacaatgggcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aactacatactgttttgtgtatgggtaatttatagttcaaatgatattctacaatgggcc 620

                                                                       
Query: 421 ctatttttatttattactaatatatgtgcaatgcgaaaaataataggacacatttttgtg 480
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 ctatttttatttattactaatatatgtgcaatgtgaaaaataataggacacatttttgtg 680

                                                                       
Query: 481 cctatgggtaatgtactttgatcatattcacccttctttctgacctttctcatgtttcct 540
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cctatgggtaatgtaccttgatcatattcacccttctttctgacctttctcatgtttcct 740

                  
Query: 541 tataggt 547
            ||||||
Sbjct: 741 cataggt 747


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space:   503169
Effective search space used:   503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)