TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAATCTAGAAATTCTGATTGGATAGTCCACTTTCGGCATTGCTTT
CAATTGATGTGTCATAATTGTATTGCATTTATAGAGGATAATGCAGGTAT
ATCTTGTGTGTGATTAAAGCAAGCTAATGAGTGGATCAATGACCTCACTT
ACTTAGCCTTTTTGGAGACACATTTGAAATTCAGCCTCTTAGTTATTCTG
CTTTGGAATCTTTCACTGTACTGAACCATTTACTTACTGTGCTTAACCAT
TTTCTAAGTAGACCTAAGTCAAATATTCTCCATTTGTGTACGACCAGACT
CTAAGTATAGTAAAAAGGATAAATGACCGTAAAGATACTAGTATTAAGAA
AGTCACAACTTCTAGAAGAATGGGCCTCTTTTTGCTTATTCAACCTAAAC
ATTTCTGACTAAACAGTTAAAAGAGGAATAGAAACATGGACCTCAGGATG
CGGGAGAACAGTGTTAGGATTTAGTATTCATTTGCAGGGACTTTAAATGG
TGAGAAGCTAAATGCAAGTGACTCGCCTTACTTCCTTTTGTGATAAGCTT
AGAGACAGTGTCTCCTGTGATAGCTCAGATACTTAAGGGATTGGATCCAT
CTTCCCTCTAACCCTGAATCTTTGTATATTTGCCACTGTAATGTCCCATA
ACATCAATACCACTTTGTAATCTC

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAGAGACATAAAAGAGAATCTCAG
GTATAGAAGATATCATAGAAATACTGATATATTGGTCAAAGAAAATACAA
AGTGTAAAAAGATTCTAACCAAAATATCCAGGAAATTCAGGACACAGTAA
AAAGAATAAAACAAGTAAAAAAGAATAACAGGAATTGAAGAGGGTAAAGG
ATCCCAGATCAATGAACCAGAAAACATCTACAACAAAAATCACAGGAAAA
AAACTTCCCTAACCTAAAGAAAGAGATGGCCGAATATGTATAAGAACCCT
AAAGAACACCAAATAGTTTGGACCAGAAAGAAAATCCTCTTGTCACACAG
TAATCAAAGCACTAAATGTACAGAACAAAGAAAGAATATTAAAATCTGCA
AGGGGAAAAGGCCAAGTAACAAATAAAGAGAGACCTATCAGAATTACACC
TGACTTTTCAACAGAGACTCTAAAAGCCAGAAGAGTCTGAACAGAGGTCA
TGCAGATCCTAAGAGAACACAAATGCTAGCATACATGCTACTATATTCAG
CAAAACTCTCAATCCATAGATGGGGAAACCAAGATATCCCATGTCAAAAT
CAAATTTTAAACAATATCTTTCTAATAATCCATCCCTACAGAGGATTCTA
GAAAGGAAAGTCCAACACAAGGAGAGGAACTAC

Query= MSMg01no334_f07.b1 MSMg01no334_f07.b1 CHROMAT_FILE:
MSMg01no334_f07.b1 PHD_FILE: MSMg01no334_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:43 2005
         (587 letters)



>mm_chr6_110614958_110615949
          Length = 992

 Score = 1067 bits (552), Expect = 0.0
 Identities = 577/588 (98%), Gaps = 5/588 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaatctagaaattctgattggatagtccactttcggcattgctttcaattgatg 64
           |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 205 gaattcaaatctagaaattctgattggatagtccactttcagcattgctttccattgatg 264

                                                                       
Query: 65  tgtcataattgtattgcatttatagaggataatgcaggtatatcttgtgtgtgattaaag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtcataattgtattgcatttatagaggataatgcaggtatatcttgtgtgtgattaaag 324

                                                                       
Query: 125 caagctaatgagtggatcaatgacctcacttacttagcctttttggagacacatttgaaa 184
           ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 325 caagctaatgagtggatcaatgacctcacttacttaggctttttggagccacatttgaaa 384

                                                                       
Query: 185 ttcagcctcttagttattctgctttggaatctttcactgtactgaaccatttacttactg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcagcctcttagttattctgctttggaatctttcactgtactgaaccatttacttactg 444

                                                                       
Query: 245 tgcttaaccattttctaagtagacctaagtcaaatattctccatttgtgtacgaccagac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgcttaaccattttctaagtagacctaagtcaaatattctccatttgtgtacgaccagac 504

                                                                       
Query: 305 tctaagtatagtaaaaaggataaatgaccgtaaagatactagtattaagaaagtcacaac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctaagtatagtaaaaaggataaatgaccgtaaagatactagtattaagaaagtcacaac 564

                                                                       
Query: 365 ttctagaagaatgggcctctttttgcttattcaacctaaacatttctgactaaacagtta 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttctagaagaatgggcctctttttgcttattcaacctaaacatttctgactaaacagtta 624

                                                                       
Query: 425 aaagaggaatagaaacatggacctcaggatgcgggagaacagtgttaggatttagtattc 484
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaagaggaatagaaacatgggcctcaggatgcgggagaacagtgttaggatttagtattc 684

                                                                       
Query: 485 atttgcagggacttt-----aaatggtgagaagctaaatgcaagtgactcgccttacttc 539
           |||||||||||||||     |||||||||||||||||||||||||||||||||||| |||
Sbjct: 685 atttgcagggacttttctttaaatggtgagaagctaaatgcaagtgactcgccttatttc 744

                                                           
Query: 540 cttttgtgataagcttagagacagtgtctcctgtgatagctcagatac 587
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cttttgtgataagcttagagacagtgtctcctgtgatagctcagatac 792


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 992
Length adjustment: 10
Effective length of query: 577
Effective length of database: 982
Effective search space:   566614
Effective search space used:   566614
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)