Query= MSMg01no334_i08.b1 MSMg01no334_i08.b1 CHROMAT_FILE:
MSMg01no334_i08.b1 PHD_FILE: MSMg01no334_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:58 2005
(288 letters)
>mm_chr6_35179679_35180365
Length = 687
Score = 495 bits (256), Expect = e-144
Identities = 281/294 (95%), Gaps = 11/294 (3%)
Strand = Plus / Plus
Query: 1 tacacagaaactctgtcatgaaaaagcaaacccaaacaaacaaacaaaaccagaaaccaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 199 tacacagaaactctgtcatgaaaaagcaaacccaaacaaacaaacaaaacaagaaaccaa 258
Query: 61 aatgacaaaaaaaaaaaaaaaa--ctacagtggttaggaaaaccatgaaattgtttttaa 118
|||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 259 aatgacaaaaaaaaaaaaaaaaaactacagtg-ttaggaaaaccatgaaattgtttttaa 317
Query: 119 taaaaaacttgctttatttaattatgaaaattttgtaaggtttgcatgactcttggtgaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 taaaaaacttgctttatttaattatgaaaattttgtaaggtttgcatgactcttggtgaa 377
Query: 179 atgtatgtacacatactattaattatatatttaaattactctggtgataacaattttaat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atgtatgtacacatactattaattatatatttaaattactctggtgataacaattttaat 437
Query: 239 aaatatttcttttattta----tctctaaagattaaaattttctgatttttgtt 288
||||||||| | ||| ||||||||||||||||||||||||||||||||
Sbjct: 438 aaatatttc----aattaaaaatctctaaagattaaaattttctgatttttgtt 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no334_i08.g1 MSMg01no334_i08.g1 CHROMAT_FILE:
MSMg01no334_i08.g1 PHD_FILE: MSMg01no334_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:58 2005
(250 letters)
>mm_chr6_35416163_35416812
Length = 650
Score = 476 bits (246), Expect = e-139
Identities = 249/250 (99%)
Strand = Plus / Minus
Query: 1 tctctaatcccagattgtcattagaaaacatagttttaaacttgaagttaaagcaataca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tctctaatcccagattgtcattagaaaacatagttttaaacttgaagttaaagcaatact 391
Query: 61 gtaattggttaaagtgaatcaagtccacctcccactgtgagcatgaataaatgtcataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gtaattggttaaagtgaatcaagtccacctcccactgtgagcatgaataaatgtcataaa 331
Query: 121 cacaatatagagttaaaaatagaaagcaaagtcatatactacagtttagaattttaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cacaatatagagttaaaaatagaaagcaaagtcatatactacagtttagaattttaaatt 271
Query: 181 tactaaaataccagtctagaatgttcacagatacacaggtataatttggtaaagaaatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tactaaaataccagtctagaatgttcacagatacacaggtataatttggtaaagaaatgt 211
Query: 241 gcattaaact 250
||||||||||
Sbjct: 210 gcattaaact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
