Query= MSMg01no334_m19.b1 MSMg01no334_m19.b1 CHROMAT_FILE:
MSMg01no334_m19.b1 PHD_FILE: MSMg01no334_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:20 2005
(659 letters)
>mm_chr6_63221009_63222067
Length = 1059
Score = 1266 bits (655), Expect = 0.0
Identities = 658/659 (99%)
Strand = Plus / Plus
Query: 1 ttgacatagctttgaagcgacatatcctagagaatagcatcctagccattctcttttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgacatagctttgaagcgacatatcctagagaatagcatcctagccattctcttttctg 260
Query: 61 cttcagctagaggaagaagcctattcttacagtggcccaatctactttaactggaaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcagctagaggaagaagcctattcttacagtggcccaatctactttaactggaaaata 320
Query: 121 gttattttctacttttctcccattagctaagatgtatttgtaacaatataatttcctatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttattttctacttttctcccattagctaagatgtatttgtaacaatataatttcctatc 380
Query: 181 tcaaatggaaccattttaaacatcattgtgctatgaatgtttagaaaaatagcacttcta 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaaatggaaccattttaagcatcattgtgctatgaatgtttagaaaaatagcacttcta 440
Query: 241 caattgctgttttatgaaccattttttaagaattattctaaataacattgctcaacattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caattgctgttttatgaaccattttttaagaattattctaaataacattgctcaacattt 500
Query: 301 ataaatttaattgacatgtatttttaaatcaaagactagtactaataatcagataatcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataaatttaattgacatgtatttttaaatcaaagactagtactaataatcagataatcgt 560
Query: 361 ggtgttattttatttgatttatattcatagttttcacaaaattttaacgcctaatgtcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtgttattttatttgatttatattcatagttttcacaaaattttaacgcctaatgtcct 620
Query: 421 ttgacagaatttcctgtctctaaaggtataatggataagacaatcatttaaacttgcttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgacagaatttcctgtctctaaaggtataatggataagacaatcatttaaacttgcttg 680
Query: 481 agtttatgtccattatttcctttggtgactattttattttcatgagtttgtaaattaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtttatgtccattatttcctttggtgactattttattttcatgagtttgtaaattaaat 740
Query: 541 agagacatgaaatatttccatagattttgcatactttagttacatactatattgtgagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agagacatgaaatatttccatagattttgcatactttagttacatactatattgtgagaa 800
Query: 601 aattagatctcagaagagaatgtttcactccaagagtggagaagcacctgaaatgagac 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aattagatctcagaagagaatgtttcactccaagagtggagaagcacctgaaatgagac 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_m19.g1 MSMg01no334_m19.g1 CHROMAT_FILE:
MSMg01no334_m19.g1 PHD_FILE: MSMg01no334_m19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:20 2005
(660 letters)
>mm_chr6_63435520_63436581
Length = 1062
Score = 1156 bits (598), Expect = 0.0
Identities = 644/664 (96%), Gaps = 13/664 (1%)
Strand = Plus / Minus
Query: 1 tagtgcttagtcctttaaacatatagaagtctctttaagctttttagccagtcattgcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tagtgcttagtcctttaaacatatagaagtctctttaagctttttagccagtcattgcac 623
Query: 61 acccatatttgaaataaagttattaagccagaaggtaaggatctgacagccctgaatagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 acccatatttgaaataaagttattaagccagaaggtaaggatctgacagccctgaatagt 563
Query: 121 gatcaccacctagcgctgaacatagtatccatggctctgaacgtgggtcctgataatt-- 178
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 562 gatcaccacctagcgctgaacatagtatccatggctctgaacatgggtcctgataattcc 503
Query: 179 -ccccatcccccagctatttttccatcacatatttgaaatccagctcgtcatcctgaaag 237
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 502 ccccc--cccccagctatttttccattacatatttgaaatccagctcgtcatcctgaaag 445
Query: 238 gctatcctagcaaagttcccttatattcatagatggatgcccagtttccaaatcatcctc 297
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 444 gctatcctagcaaagttcccttttattcatagatggatgcccagtttccaaatcatcctc 385
Query: 298 agaaaatgctgtgatcagtgagttactcatctaagatttgaaacatgaagaaatggaact 357
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agaaaatgccgtgatcagtgagttactcatctaagatttgaaacatgaagaaatggaact 325
Query: 358 gttggttgttaaaagtaccttctaatccataattctgaaactgagtgaagactttgtgaa 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gttggttgttaaaagtaccttctaatccataattctgaaactgagtgaagactttgtgaa 265
Query: 418 tttggtatagttttattttattttatctttattttgtactttttactaaaaagtctttt- 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttggtatagttttattttattttatctttattttgtactttttactaaaaagtcttttt 205
Query: 477 aaaatattattattattattattattattattattattattattatcttactcaatttac 536
|||| |||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 204 aaaaaattattattattattattattattattattatta--a----cttactcaatttac 151
Query: 537 atccacaactgtccctgtcttggttacccccttccacaatccttcccccattcaccctcc 596
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||
Sbjct: 150 atccacaactgtccctgtcctggttaccgccttccacaatccttcccccattcaccc-cc 92
Query: 597 ccctttttctctgagcaggtggaggtcccctgtgtattcccccaccctggcacattaagt 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 ccctttttctctgagcaggtggaggtcccctgtgtattcccccaccctggcacattaagt 32
Query: 657 gtct 660
||||
Sbjct: 31 gtct 28
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1062
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1052
Effective search space: 683800
Effective search space used: 683800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
