Query= MSMg01no336_i02.b1 MSMg01no336_i02.b1 CHROMAT_FILE:
MSMg01no336_i02.b1 PHD_FILE: MSMg01no336_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:35 2005
(663 letters)
>mm_chr6_78537407_78538470
Length = 1064
Score = 1208 bits (625), Expect = 0.0
Identities = 651/660 (98%), Gaps = 1/660 (0%)
Strand = Plus / Minus
Query: 5 gaattcttaaagtatactgtagtatctaaaactaaataaatatgtattaaattcatcaat 64
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 864 gaattcttaaagcatactgtagtatctagaactaaataaatatgtattaaattcatcaat 805
Query: 65 caatagcagaagtccacagaatttatttcaaaaagtgaatatgagagaattgctcatagg 124
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 804 caatagcagaagtccacagaatttatttcaaaaagtgaacatgagagaattgctcatagg 745
Query: 125 aaaatgtgttattcccatatggcctcttatactaatgtatagaaaaatattatccattat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aaaatgtgttattcccatatggcctcttatactaatgtatagaaaaatattatccattat 685
Query: 185 gatgtagatttacagtgggaagaatgtctgaggtttaagtgacttcatcttcagttgcta 244
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 684 gaggtagatttacagtgggaagaatgtctgaggtttaagtgacttcatcttcatttgcta 625
Query: 245 cttactattcatatctatgatcctcctcactgttaggatttgaacatataaccatgtgtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cttactattcatatctatgatcctcctcactgttaggatttgaacatataaccatgtgtt 565
Query: 305 tggttttgcaattgtttcatctcta-tttttttccattacaggggatttagtattatatt 363
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 564 tggttttgcaattgtttcatctctattttttttccattacaggggatttagtattatatt 505
Query: 364 ttctgataccacttatcagcattttgtaagaaaatagatagctccctggatttctaaagc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttctgataccacttatcagcattttgtaagaaaatagatagctccctggatttctaaagc 445
Query: 424 ttaggactcatctttcagtgaagtcctaaactgtctgtactatagcaagtgaaatccagc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttaggactcatctttcagtgaagtcctaaactgtctgtactatagcaagtgaaatccagc 385
Query: 484 ttgaaaaataaggatgagggtcttgttcgttctgcaacaggcttctttgggggagcacag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgaaaaataaggatgagggtcttgttcgttctgcaacaggcttctttgggggagcacag 325
Query: 544 caaagagtcaggggcaggaggttaggaataaatggctcanagcatcataagcagagtctg 603
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 324 caaagagtcagaggcaggaggttaggaataaatggctcaaagcatcataagcagagtctg 265
Query: 604 ggctgaaacagaacttgaaggtatcaattcctgctcaaaactaagatgctttctttgtca 663
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 264 ggctgaaacagaacttgaaggtatcaattcctgttcaaaactaagatgctttctttgtca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1064
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1054
Effective search space: 688262
Effective search space used: 688262
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_i02.g1 MSMg01no336_i02.g1 CHROMAT_FILE:
MSMg01no336_i02.g1 PHD_FILE: MSMg01no336_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:35 2005
(595 letters)
>mm_chr6_78376538_78377532
Length = 995
Score = 1054 bits (545), Expect = 0.0
Identities = 583/596 (97%), Gaps = 2/596 (0%)
Strand = Plus / Plus
Query: 1 ttgtcttaaggaatgagagatgagagagcaaggatgca-gagaatggagtaggtagccat 59
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 201 ttgtcttaaggaatgagagatgagagagcaaggatgcatg-gaatggagtaggtagccat 259
Query: 60 cccaagtctattctgtatccaaggtcctaccgaaaaactctaccagttggctcatcttct 119
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 260 cccaagtctattctgtatccaaggtcctacagaaaaactctaccagttggctcatcttct 319
Query: 120 agccttgtcccagccctgagcatatcctttaaccatttttccccccacaggccaggaagc 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agccttgtcccagtcctgagcatatcctttaaccatttttccccccacaggccaggaagc 379
Query: 180 tgaagaagacctgccatctgccaggatcagttgcccagaaggttccaatgcctacagctc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgaagaagacctgccatctgccaggatcagttgcccagaaggttccaatgcctacagctc 439
Query: 240 ctattgttactacttcactgaagaccgtttaacttgggctgatgcagatgtgagcaagta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctattgttactacttcactgaagaccgtttaacttgggctgatgcagatgtgagcaagta 499
Query: 300 ggggaatgtgtgggagggatgcgtctgaacttagctgccactgagcctccctcatgcctt 359
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 500 ggggaatgtgtgggagggatgcgtctgaacttagctgccactgagcctctctcatgcctt 559
Query: 360 cagaagcttctttagctcaccactgacacatcattggggttttcttccccatgcctctct 419
|||||| ||||||||||||||| |||||||||||||||||||||||||||| | ||||||
Sbjct: 560 cagaagtttctttagctcaccattgacacatcattggggttttcttccccacgtctctct 619
Query: 420 attgttttataccttcccaaacagagatcctgggagtaagtcatagccctatcaggatca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 attgttttataccttcccaaacagagatcctgggagtaagtcatagccctatcaggatca 679
Query: 480 tgctgtccttgcccttttctgactctttccttgggaggacagagtatattccttnaaact 539
||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 680 tgccctccttgcccttttctgactctttccttgggaggacagagtatattccttaaaact 739
Query: 540 tctatctccattgagtaatcttcttctcttccacttacacagcttttttgccagaa 595
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tctttctccattgagtaatcttcttctcttccacttacacagcttttttgccagaa 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
