TXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAATT
CAATTCCCCAATAAAAAGACATAGACTAACAGACTGGCTACACAAAGAGG
ACCCAACATTCTTCTACTTACAGGAAACTTATCTCAGGGAAAAAGACAGA
CACTACCTCAGAGTGAAAGGCTGAAAAACAATTTTCCAAGCAAATGGTCT
GAAGAAAAAAGGTGGAGTAGCCATTCTGATATGGAATAAAATCGACTTCC
AACCCAAAGTTATCAAAAAAGACAAGGAGGGACACTTCATACTCATCAAA
GGTAAAATCCTCCAAGAGGAACTCTCAATTCTGAATATCTATGCTCCAAA
TGCAAGGGCAGCCACATTCATTAAAGACACTTTAGTAAAGCTCAAAGCAC
ACATTGCACCTCACACAATAATAGTGGGAGACTTCAACACACCACTTTCA
TCAATGGACAGGCCATGGAAACAGAAACTAAACAGGGACACAGTAAAACT
AAATGAAGTTATGAAACAAATGGACTTAACAAATATCTATAANACATTTT
ATCATAAAACAAAAGGATATACCTTCTTCTCAGCACCTCACGGGACCTTC
TCCAAATTGACCATATAATTGGGCACAGAACAAGCCTCCACAGATAGAAA
ATATTGAATTGGCCCACGCATCCTATCAAACACCATGGGCTAAGGTTGAT
CTTCTTAAAACATAATTAATGGAAGGCACATTTTGN

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXAGTTTGATGAGGGTAAAGCAGTTCATGAAA
TATCTTATCTGTTTAAGACACTGTGATACTCAGAATGGTTTTGAATTAGC
CATCCTTCTGTCTCTCTCTGCCTGTGCTTATAGGCATATTCCATGATGGC
TGGCAAAACCTCTTATGCAAGGTTTTCCTGCATCTGCTAAGTTGGCTTTT
CAGGAAGATGAAGAAACCAGATTTTTTTTTCCCTGTGTCTAGGCACTTTG
CAATGAATTGGATGAACACTAAATTCTTGACAGATATTCGAACTCCTGAA
CACTACTCCTAGGGGAAATTCTATTACTTCTGTCCCAATGATGGTACTCT
TGACTTTCCGAATAATTAGGATCAGTATGAGCCCATAAGCATGTTTCTAA
GTGGTTCTCTGTGCTACTTCACTTGAAATATGATCATCCACCCTAAACAG
GGATTGCTTCATGTCATGGGCTTAGTCCTGGGCAGCTTAAGAAGAACAAA
GCAGGATGAAGAATGTTATTCTTCCCTCCCTGCCTCCTGACCTTGAGTGA
AACCAACAAACAACAAACAACAAACAAAAACAAAACAAACAACCTAAACA
AACCAAACCAACCAAACAAAAACTGAAGAGTCCTCCACATGATTTTCTTT
TAGAAGATGGGGGATTCAGCCAAATGTGAAACAA

Query= MSMg01no336_i16.g1 MSMg01no336_i16.g1 CHROMAT_FILE:
MSMg01no336_i16.g1 PHD_FILE: MSMg01no336_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:38 2005
         (524 letters)



>mm_chr6_78246148_78247071
          Length = 924

 Score =  891 bits (461), Expect = 0.0
 Identities = 509/525 (96%), Gaps = 2/525 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtttgatgagggtaaagcagttcatgaaatatcttatctgtttaagacactgtgatact 60
           |||||||||||||| ||||||||||| ||||||||||| ||||||||| |||| ||||||
Sbjct: 201 agtttgatgagggttaagcagttcataaaatatcttatttgtttaagatactgcgatact 260

                                                                       
Query: 61  cagaatggttttgaattagccatccttctgtctctctctgcctgtgcttataggcatatt 120
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 cagaatggttttgaattagccatcattctgtctctctctgcctgtgcttataggcatatt 320

                                                                       
Query: 121 ccatgatggctggcaaaacctcttatgcaaggttttcctgcatctgctaagttggctttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatgatggctggcaaaacctcttatgcaaggttttcctgcatctgctaagttggctttt 380

                                                                       
Query: 181 caggaagatgaagaaaccagatttttttttccctgtgtctaggcactttgcaatgaattg 240
           ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 381 caggaagatgaagaaaccagatttttttt-ccctgtgtctaggcactttgcagtgaattg 439

                                                                       
Query: 241 gatgaacactaaattcttgacagatattcgaactcctgaacactactcctaggggaaatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gatgaacactaaattcttgacagatattcgaactcctgaacactactcctaggggaaatt 499

                                                                       
Query: 301 ctattacttctgtcccaatgatggt-actcttgactttccgaataattaggatcagtatg 359
           | ||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||| |
Sbjct: 500 ccattacttctgtcctaatgatggtcactcttgactttccgattaattaggatcagtacg 559

                                                                       
Query: 360 agcccataagcatgtttctaagtggttctctgtgctacttcacttgaaatatgatcatcc 419
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 560 agcccataagcatgtttctaagtggttctctgtgctacttcacttgaagtatgatcatcc 619

                                                                       
Query: 420 accctaaacagggattgcttcatgtcatgggcttagtcctgggcagcttaagaagaacaa 479
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 620 accctaaacagggattgcttcatgtcgtgggcttagtcctgggcagcttaagaagaacaa 679

                                                        
Query: 480 agcaggatgaagaatgttattcttccctccctgcctcctgacctt 524
           ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 680 agcaggatgaagaatgttattcttctctccctgcctcctgacctt 724


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space:   469796
Effective search space used:   469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)