Query= MSMg01no338_d14.b1 MSMg01no338_d14.b1 CHROMAT_FILE:
MSMg01no338_d14.b1 PHD_FILE: MSMg01no338_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:49 2005
(599 letters)
>mm_chr6_87083216_87084214
Length = 999
Score = 1123 bits (581), Expect = 0.0
Identities = 592/596 (99%)
Strand = Plus / Minus
Query: 4 ggaattcatgctgtctaaagtgggtggaattcgtttgcaagctatgcaaagcctgatctt 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 ggaattcatgctgtgtaaagtgggtggaattcgtttgcaagctatgcaaagcctgatctt 922
Query: 64 actcaccaggaggatggaaagggtttttttagttatctgagctcagctgagttatcacgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 actcaccaggaggatggaaagggtttttttagttatctgagctcagctgagttatcacgc 862
Query: 124 ttggagaaccgatttaaaggaattagaatatgatttctgaatacacataacattaaactc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ttggagaaccgatttaaaggaattagaatatgatttctgaatacacataacattaaactc 802
Query: 184 ttctctttttctatggtaatttagttatggacgttcagcgtctctgagttattgttataa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttctctttttctatggtaatttagttatggacgttcagcgtctctgagttattgttataa 742
Query: 244 aagacttgtcatcaccgcactgtgctgtaggagactgggctgaacctgtacaatggtata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagacttgtcatcaccgcactgtgctgtaggagactgggctgaacctgtacaatggtata 682
Query: 304 ccctggaagttgcttttttaaaaaataataataataaacacctaaaatcagtgcttgtta 363
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 ccctggaagttgcttttttaaaaaaaaataataataaacacctaaaatcagtgcttgtta 622
Query: 364 cttgttatttctatacctgccataaaaataatatgcacgtgtttcaagtacttactgagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttgttatttctatacctgccataaaaataatatgcacgtgtttcaagtacttactgagg 562
Query: 424 atcataaaagcagagctagcgggccagtgagacggctcagctggcaaaggggcttgctgc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcataaaagcagagctagcgggccagtgagacggctcagctggcaaaggggcttgctgc 502
Query: 484 caagcctgacagcctgagctcaatccatggggcccacatggtggaaggagaaaacccact 543
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 caagcctgacagcctgagctcaatccatggggcccacatggtggaaggagagaacccact 442
Query: 544 cctganagctgccctcttgcctccctgtgtacactaaaggacacaagcatccacat 599
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgaaagctgccctcttgcctccctgtgtacactaaaggacacaagcatccacat 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_d14.g1 MSMg01no338_d14.g1 CHROMAT_FILE:
MSMg01no338_d14.g1 PHD_FILE: MSMg01no338_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:49 2005
(580 letters)
>mm_chr6_86948475_86949453
Length = 979
Score = 1069 bits (553), Expect = 0.0
Identities = 574/581 (98%), Gaps = 2/581 (0%)
Strand = Plus / Plus
Query: 1 cagggcagcctagactgcacgacacactgtcccaaaagagaaaatccatccagggctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cagggcagcctagactgcacgacacactgtcccaaaagagaaaatccatccagggctaaa 259
Query: 61 gcctgaatgccaggctgcacttgcaatcacttagttgtgatagccttaaaatttgaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcctgaatgccaggctgcacttgcaatcacttagttgtgatagccttaaaatttgaaagt 319
Query: 121 cagggtttgggtgcacaaggcagcagcagaagatatgcttagcttgcacaatgccctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cagggtttgggtgcacaaggcagcagcagaagatatgcttagcttgcacaatgccctggg 379
Query: 181 gtctgtcgtcagtacacaaaaacaatacagttaaatctagaagtcttgacggtaatataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtctgtcgtcagtacacaaaaacaatacagttaaatctagaagtcttgacggtaatataa 439
Query: 241 gaatgactatttttt-atgatatcaggtacttttaaccccagaacttgtgaggcaaggac 299
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 440 gaatgactatttttttatgatatcaggtacttttaaccccagaacttgcgaggcaaggac 499
Query: 300 aggtggatctctgtgagtttgaggccagcctgtctacataacaagttccaggccagccag 359
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 500 aggtggatctctgtgagtttgaagccagcctgtctacataacaagttccagtccagccag 559
Query: 360 tgagtgaaaccctgtctttagaggggggtagggggctatttttccctcttttcttcatag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgagtgaaaccctgtctttagaggggggtagggggctatttttccctcttttcttcatag 619
Query: 420 cattctccacctgtttcaataacaggcactgcgtcggggcccataacagcgccatttgag 479
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 620 cattctccacctgtttcaataacaggcactgcgtcggggcccatagcagcgccatttgag 679
Query: 480 gactccaccccaacagaaacctgcctttcacttcagtaaaggttaaacattttctttagg 539
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gactccaccccaccagaaacctgcctttcacttcagtaaaggttaaacattttctttagg 739
Query: 540 aattttctttctcacaattattatttttttaatttcctgta 580
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 740 aattttctttctcacaattattatttttt-aatttcctgta 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 979
Length adjustment: 10
Effective length of query: 570
Effective length of database: 969
Effective search space: 552330
Effective search space used: 552330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|