Query= MSMg01no338_i06.b1 MSMg01no338_i06.b1 CHROMAT_FILE:
MSMg01no338_i06.b1 PHD_FILE: MSMg01no338_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:10 2005
(299 letters)
>mm_chr6_76701623_76702321
Length = 699
Score = 443 bits (229), Expect = e-129
Identities = 281/299 (93%), Gaps = 5/299 (1%)
Strand = Plus / Plus
Query: 4 cgaatggctgagaagcacctgaaaaaatgctcagcatccttaatcatcagagaaatgcaa 63
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 202 cgaatggctgagaagcacctgaaaaaatgctcagcatctttaatcatcagagaaatgcaa 261
Query: 64 atcaaaacaaccctgagattccatcttttttttt--aatgagtagtttctttgctttttg 121
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 262 atcaaaacaaccctgagattccatctttttttttttaatgagtagtttctttgcttgttg 321
Query: 122 ttttgactcatgctgtactaaggtttctattccaaaatgttacaag-gtttatgtagacc 180
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 322 ttttgactcatgctgtactaaggtttctattccaaaatgttacaagtgtt-atgtagacc 380
Query: 181 ttctcatccaagagtaaaataaagcatactttattcaattaagaatattacaattttcat 240
|||||||||| |||| ||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 381 ttctcatccatgagtgaaataaagcatactttattcaattaagaatactaaaattttcat 440
Query: 241 gtaattatgtggtgtgtttgtgtatatatgtttgtgtgtgtgtgtgtg-gtgtatgtgt 298
||||||||||||| ||| ||||| | | ||| |||||||||||||||| |||| |||||
Sbjct: 441 gtaattatgtggtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_i06.g1 MSMg01no338_i06.g1 CHROMAT_FILE:
MSMg01no338_i06.g1 PHD_FILE: MSMg01no338_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:10 2005
(548 letters)
>mm_chr6_76899551_76900498
Length = 948
Score = 719 bits (372), Expect = 0.0
Identities = 414/434 (95%), Gaps = 10/434 (2%)
Strand = Plus / Minus
Query: 125 actgatgcagtactttggagggaaatgcatgggtaggattatggacattatttatgtgta 184
|||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 actgatacagtgctttgaagggaaatgcatgggtaggattatggacattatttatgtgta 889
Query: 185 tgttttaaaatacatatataatatatacaagtagatattatatgtaaaatcatttaaatt 244
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 888 tgttttaaaatacatatataatatatgcaagtagatattatgtgtaaaatcatttaaatt 829
Query: 245 taattttaaatttaattttaaattgattaaaaatttaaaagta----------ataatat 294
|||||||||| ||||||||||||||||||||||||| |||||| |||||||
Sbjct: 828 taattttaaaattaattttaaattgattaaaaattttaaagtaataatataatataatat 769
Query: 295 aatataatatatattaatatgtatgtagcctaaaggcaccatgcttcaaatatatatcac 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 aatataatatatattaatatgtatgtagcctaaaggcaccatgcttcaaatatatatcac 709
Query: 355 agaggtattagaatcaaattcataggcaggaacgcagactcacattggaaaacagtttat 414
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 708 agaggtattagaatcaaattcataggcaggaacacagactcacattggaaaacagtttat 649
Query: 415 ctgatgtgggtgtgcactctgtgaggcacattacaaactgcaggctttcaaaacattcac 474
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ctgatgtgggtgtgctctctgtgaggcacattacaaactgcaggctttcaaaacattcac 589
Query: 475 cactccctttgccaatgtttgccaagctttcagcattgcttttccttgccattttaaaca 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 cactccctttgccaatgtttgccaagctttcagcattgcttttccttgccattttaaaca 529
Query: 535 gagaaatttttagc 548
|||||||| |||||
Sbjct: 528 gagaaattgttagc 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
