TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGGACTGACACAGACTCAGTTCTCATATCTGATGACAAGCAAT
GGGCAAAGCATAGTAAGTGCTGGGAGGAACCAATGGGTACCACGACTCCC
TCCAGCCGGGAATACTCAGCTGCTTTTCATTACTCTACTGGATGTGCTTA
AGTCAGTATCACCTCCCTCTGTTCCACAAGTTTATTTAATTGCTATTGAC
TACTGGTATGTATTGAGTTCAAGGTCAGAAACCACAGTGCCAATTAGACA
AACTGGTCTGATGAGAGAACAAGGGAGAATGTTGTTCTCCTGTTTGAAGG
GTATAACAGTGGTTATCATAATGTTTCTCATCAATATAGCTCACTGGAAA
GAACAGGGAGAGCAAGAGCACACCTTTATGTAAGATGCTCAACTGATCAT
GGAATTACCGTGGAAAACAGCTCTCATTTATTACCAAGCAGTTACTTGCT
GAGCACCGCGATAGGATCTTTATTGGATTAGGATAGTTGAATCTGCTGGT
TTTATAGAGATTGAAGTGCTAAAGAAAAGACCCTCCCAGCACCACATCCC
ATGACAGAATGGGAGGCAAGGGACTAGTCATTCCACTATTACCATATCCT
AACATGTACTGTGAGTTCATGAAGGCACAGCACAGCACTGGCATAATTGT
GGGTTACACATTTGGGCTTTGTGATGTTTAATGCAGAGCACAAN

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGACAGAGAAGCACTTG
AAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAAC
CCTGAGATTCCACCTCATACCAGTCAGAATGGCTAAGATGAAAAATTCAG
GTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCAT
TGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCG
GTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTC
TCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGC
TCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGA
ACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCT
ACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTC
CTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACA
TTCACAAAGAAACTCACACAATATGTACTCACTGATAAGTGGATATTAGC
CCCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTAAACACATGA
AACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGA
A

Query= MSMg01no338_p03.b1 MSMg01no338_p03.b1 CHROMAT_FILE:
MSMg01no338_p03.b1 PHD_FILE: MSMg01no338_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:41 2005
         (614 letters)



>mm_chr6_111602690_111603703
          Length = 1014

 Score = 1112 bits (575), Expect = 0.0
 Identities = 599/607 (98%)
 Strand = Plus / Minus

                                                                       
Query: 8   ttctttggactgacacagactcagttctcatatctgatgacaagcaatgggcaaagcata 67
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 ttctttggactgacacagactcagttctcatatctgatgacaagcaatgggcaaagcata 755

                                                                       
Query: 68  gtaagtgctgggaggaaccaatgggtaccacgactccctccagccgggaatactcagctg 127
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 gtaagtgctgggaggaaccaatgggtaccacgactccctccagccgggaatactcagctg 695

                                                                       
Query: 128 cttttcattactctactggatgtgcttaagtcagtatcacctccctctgttccacaagtt 187
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 694 cttttcattactctactggaggtgcttaagtcagtatcacctccctctgttccacaagtt 635

                                                                       
Query: 188 tatttaattgctattgactactggtatgtattgagttcaaggtcagaaaccacagtgcca 247
           ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tatttaactgctatcgactactggtatgtattgagttcaaggtcagaaaccacagtgcca 575

                                                                       
Query: 248 attagacaaactggtctgatgagagaacaagggagaatgttgttctcctgtttgaagggt 307
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 574 attagacaaactggtctgatgagagaacaagggagaatgttgttctcctgtttgaaggat 515

                                                                       
Query: 308 ataacagtggttatcataatgtttctcatcaatatagctcactggaaagaacagggagag 367
           |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 514 ataacagtggttatcataatgtttctcatcaatatagctcactggaaaaaatagggagag 455

                                                                       
Query: 368 caagagcacacctttatgtaagatgctcaactgatcatggaattaccgtggaaaacagct 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 caagagcacacctttatgtaagatgctcaactgatcatggaattaccgtggaaaacagct 395

                                                                       
Query: 428 ctcatttattaccaagcagttacttgctgagcaccgcgataggatctttattggattagg 487
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ctcttttattaccaagcagttacttgctgagcaccgcgataggatctttattggattagg 335

                                                                       
Query: 488 atagttgaatctgctggttttatagagattgaagtgctaaagaaaagaccctcccagcac 547
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 atagttgaatctgctggttttatagagattgaagtgctaaagaaaagaccctcccagcac 275

                                                                       
Query: 548 cacatcccatgacagaatgggaggcaagggactagtcattccactattaccatatcctaa 607
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 cacataccatgacagaatgggaggcaagggactagtcattccactattaccatatcctaa 215

                  
Query: 608 catgtac 614
           |||||||
Sbjct: 214 catgtac 208


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space:   606416
Effective search space used:   606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)