XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTATATTGTCCTTAGTTCATCTAGAATTAATTCATGACAGTTCATCT
TCATATTGATTTGTAGGAAATTTGCTCAGTATGGTAGGCTGCGCACAGGA
GTCATTATGCTATGTAACAGTGACAGGAAAGGCATACCAGTAGTGAAAAG
CAATCCTGGGACAAAGTCTTTGGGGCTGTCCCTCTCCAGAGTGTACACGC
TGCAGCCAGGGAAAACAGTGGGCCATCTCCAGGAAACTCATTTGCTTGCT
ATAGACCTTCCTAGCCGGCTTCTGTCAACAAACGGACTAAGAACAGGCTT
GATGGCTCACTCCTGTAATTCCAGCACTTAGAAGCCTGAGGCAGAGGATT
GCCATGAATTTGAGGCCACTGGACTGCATAGTGAGGTGCAGACTAGCCTG
AGCTACAGGGTGAGACCCTATCTAAAACAAAACAAAACAAACCCAAAACC
AACCAAACCAAAATCTAACCCACCAACCAACCAACCATGAAACTAAATAC
TACTTTATATAGAAAAGATTAACGATGATTCCCTTCACGGTTTCTTTCAT
ACACAATTATCAAGTCAATATTAGCCTTTTTTATTTAAACACTTTTGTTT
TTTTGTAATTTTTAACAAAAATCATAATCATGTTTTCAACATGGAACATA
CAACAACCTTTATTTAATCGGGGTGGCGAGATAATGTATTCTCGTACTAA
TTAATTTTCATCCN

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGAATAAAAGCAAACCAAG
CTTAAATGGTACTGCTCTCTGACAGATCATTAAATGACCTCAAAGAAGAA
GATCAGTAAGTGACTTTCTTGGCACATAGCCCAAAAGGAATTCAAAGGTT
TTTGTTTTTTTTTTTTTAATTCTCTCATCTATTTACTTATATAAAAATAT
TTCTTGTTGTAAACATTTAAATGAAAAATCTGGATAGCCATAATTGAAAC
CAGATTCATCCCAACACCAAATAGTGTTCACCACTGACACATGAACTGAT
TTTTATTATGTATTTGTCTTATAAGAAAACACATCAGTGGCTGTTCACCT
TCAATAATCATAGCTAGAATTAAAAAAAACTGTACTTGTTACAATGTAGC
TATTCTCAGTGTATCACACACACAACCTCTTAACAGTTAAGTCAGGTTCA
TATTACTTTTAATCTCCATTTTAGGAGCAACTATACCTAAAGCTTGGCTT
TGAACTATTTATTTCAGCTCCTGAATCTGTACAATATGACCTCAATACAT
TTCAACAAACAATAGTACTGTTTTTAAAGTTGTTTATTCAAAAAGGTCCA
TAATTAATATGGCCATGATTTATTAATTATTGCCCCCAAACACGGCAATT
CTAAAAAATGTACTAATTTATTTTCCGAATTTATTTTAAATAATTTAATT
TAA

Query= MSMg01no339_c11.g1 MSMg01no339_c11.g1 CHROMAT_FILE:
MSMg01no339_c11.g1 PHD_FILE: MSMg01no339_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:56 2005
         (528 letters)



>mm_chr6_148335066_148335995
          Length = 930

 Score =  955 bits (494), Expect = 0.0
 Identities = 517/530 (97%), Gaps = 10/530 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgaataaaagcaaaccaagcttaaatggtactgctctctgacagatcattaaatgacc 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 209 tttgaataaaagcaaaccaagcttaaatggtactgctctctgacagatcattaaatgatc 268

                                                                       
Query: 61  tcaaagaagaagatcagtaagtgactttcttggcacatagcccaaaaggaattcaaaggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcaaagaagaagatcagtaagtgactttcttggcacatagcccaaaaggaattcaaaggt 328

                                                                       
Query: 121 ttttgtttttttttttttaattctctcatctatttacttatataaaaatatttcttgttg 180
           ||||        ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tttt--------ttttttaattctctcatctatttacttatataaaaatatttcttgttg 380

                                                                       
Query: 181 taaacatttaaatgaaaaatctggatagccataattgaaaccagattcatcccaacacca 240
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 taagcatttaaatgaaaaatctggatagccataattgaaaccagattcatcccaacacta 440

                                                                       
Query: 241 aatagtgttcaccactgacacatgaactgatttttattatgtatttgtcttataagaaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatagtgttcaccactgacacatgaactgatttttattatgtatttgtcttataagaaaa 500

                                                                       
Query: 301 cacatcagtggctgttcaccttcaataatcatagctagaattaaaaaaaa--ctgtactt 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 501 cacatcagtggctgttcaccttcaataatcatagctagaattaaaaaaaaaactgtactt 560

                                                                       
Query: 359 gttacaatgtagctattctcagtgtatcacacacacaacctcttaacagttaagtcaggt 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttacaatgtagctattctcagtgtatcacacacacaacctcttaacagttaagtcaggt 620

                                                                       
Query: 419 tcatattacttttaatctccattttaggagcaactatacctaaagcttggctttgaacta 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatattacttttaatctccattttaggagcaactatacctaaagcttggctttgaacta 680

                                                             
Query: 479 tttatttcagctcctgaatctgtacaatatgacctcaatacatttcaaca 528
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttatttcagctcctgaatctgtacaatatgacctcaatacatttcaaca 730


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 930
Length adjustment: 10
Effective length of query: 518
Effective length of database: 920
Effective search space:   476560
Effective search space used:   476560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)