Query= MSMg01no339_e06.b1 MSMg01no339_e06.b1 CHROMAT_FILE:
MSMg01no339_e06.b1 PHD_FILE: MSMg01no339_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:04 2005
(480 letters)
>mm_chr6_76934237_76935116
Length = 880
Score = 745 bits (385), Expect = 0.0
Identities = 398/403 (98%), Gaps = 2/403 (0%)
Strand = Plus / Minus
Query: 78 ctagcttcctataatccagtggaaagtgcaaccctggggaatattgttacccatgtttac 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 ctagcttcctataatccagtggaaagtgcaaccctggggaatattgttacccatgtttac 821
Query: 138 agtgagctttctcagttcaattaaactaatctagatattttctcacccgcatgcgcagac 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 agtgagctttctcagttcaattaaactaatctagatattttctcacccgcatgcgcagac 761
Query: 198 gctaacccagtctcagtaatccatcacagatgggtctggaggcttgtttcctaggtgata 257
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 gctaacccagtctcagcaatccatcacagatgggtctggaggcttgtttcctaggtgata 701
Query: 258 caagattctgtcaagttgacaatcaacactaactctctccatgcccttccatgagacaca 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 caagattctgtcaagttgacaatcaacactaactctctccatgcccttccatgagacaca 641
Query: 318 ccatctggttcttgtttccatctccctttttcttatagccattcaggaatcagaggtatt 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ccatctggttcttgtttccatctccctttttcttatagccattcaggaatcagaggtatt 581
Query: 378 atttcattgacagtgctgctatatttttttaaagagatgtaagaaaatattaacccaagc 437
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 580 atttcattgacagtgctgctatatttttttaaagagatgtaagaaaatattaacccaaac 521
Query: 438 ttggtttctgtaatactttgctttttttttttaagttagtgtc 480
||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 520 ttggtttctgtaatactttgc--tttttttttaagttggtgtc 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_e06.g1 MSMg01no339_e06.g1 CHROMAT_FILE:
MSMg01no339_e06.g1 PHD_FILE: MSMg01no339_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:04 2005
(429 letters)
>mm_chr6_76774521_76775349
Length = 829
Score = 791 bits (409), Expect = 0.0
Identities = 424/429 (98%)
Strand = Plus / Plus
Query: 1 tcctttgtgtaaaaccattgtgtatataaatttctatttctgcagagttgattatttgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctttgtgtaaaaccattgtgtatataaatttctatttctgcagagttgattatttgag 260
Query: 61 tcctgaatggaagctctgtaagatttattaagttctacatggtgttcattaggaattaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctgaatggaagctctgtaagatttattaagttctacatggtgttcattaggaattaac 320
Query: 121 tcagaaacttcaggaagtccctccctgaaactaagatgatgcacaaagcctcttctttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagaaacttcaggaagtccctccctgaaactaagatgatgcacaaagcctcttctttct 380
Query: 181 caagtttatgtaagggttaaggactgtcaaggtgatcatcagatcaaccaagatgcctag 240
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 caagtttatgtaagggttatggactgtcaagatgatcatcagatcaaccaagatgcctag 440
Query: 241 aagagactgtctgatcttccaagctgccttcagatcatgcaagctatcgcccatctggta 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagagactgtctgatctgccaagctgccttcagatcatgcaagctatcgcccatctggta 500
Query: 301 tggacttctagtaattatctgtgagttatttatcctccacaatcatatttctgtaagtaa 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 tggacttctagtaattatctgtgagtcatttatcctccacaatcatatttctgtaagtaa 560
Query: 361 tctcaatatactctttggttcacctagttcaatattggtgtgcttattacgtgggtctat 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcccaatatactctttggttcacctagttcaatattggtgtgcttattacgtgggtctat 620
Query: 421 ttttggttc 429
|||||||||
Sbjct: 621 ttttggttc 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
