Query= MSMg01no339_n05.b1 MSMg01no339_n05.b1 CHROMAT_FILE:
MSMg01no339_n05.b1 PHD_FILE: MSMg01no339_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:45 2005
(645 letters)
>mm_chr6_26893130_26894174
Length = 1045
Score = 1162 bits (601), Expect = 0.0
Identities = 633/645 (98%), Gaps = 3/645 (0%)
Strand = Plus / Minus
Query: 4 ggaattcataagtatcccagtttctctgatttttgagcaaatttccaactgaagacaagc 63
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 ggaattcataagtaacagagtttctctgatttttgagcaaatttccaactgaagacaagc 776
Query: 64 aaaggtagcaaaaagatcacaggtaagcaactacatcagaagccccactctagtaagcct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 aaaggtagcaaaaagatcacaggtaagcaactacatcagaagccccactctagtaagcct 716
Query: 124 gtctctggctgactcctcatgcccagagcttccaatctgggcatactgggaactcctctt 183
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 715 gtctctggctgactcctcatgcccagagcttccaatctgggcacactgggaacgcctctt 656
Query: 184 tttccttagaaacctttcctgtttttcttgcatatgattgttgctcaatatcaagtggac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tttccttagaaacctttcctgtttttcttgcatatgattgttgctcaatatcaagtggac 596
Query: 244 tttcttgcttagtgccctttgaagaagtcattgttatttctacagtgtgcgaatatttta 303
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tttcttgcttagtgccatttgaagaagtcattgttatttctacagtgtgcgaatatttta 536
Query: 304 agtttgatttatttatactttaacttattaaactgcaaattacataaaaaacattctact 363
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 535 agtttgatttatttatactttaacttattaaactgcaaattacataacaaacattctact 476
Query: 364 tccttctctctatttgttccatatctcctccaactttttcctctcaacctaagttgttct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tccttctctctatttgttccatatctcctccaactttttcctctcaacctaagttgttct 416
Query: 424 tcccacaaaaataaaaacaaacaaaat---aacaacaacaacaacactcactgcattctc 480
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 415 tcccacaaaaataaaaacaaacaaaataacaacaacaacaacaacactcactgcattctc 356
Query: 481 taggtgcatgtttgtaggaccattctagagcatagttgcctgtcaggatcagcatccccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 taggtgcatgtttgtaggaccattctagagcatagttgcctgtcaggatcagcatccccc 296
Query: 541 aaagaaaaccaggtctcttatcttctgagttcattagtttccaaaagttcctctaccaag 600
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aaagaaaatcaggtctcgtatcttctgagttcattagtttccaaaagttcctctaccaag 236
Query: 601 ggtaagatttttgagacccttcccttccattctaggatttttgac 645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ggtaagatttttgagacccttcccttccattctaggatttttgac 191
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_n05.g1 MSMg01no339_n05.g1 CHROMAT_FILE:
MSMg01no339_n05.g1 PHD_FILE: MSMg01no339_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:45 2005
(544 letters)
>mm_chr6_26751415_26752358
Length = 944
Score = 1036 bits (536), Expect = 0.0
Identities = 542/544 (99%), Gaps = 1/544 (0%)
Strand = Plus / Plus
Query: 1 atggatgcattaatgtttttagctacatgactctttctaaaagaatctgcttttaacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atggatgcattaatgtttttagctacatgactctttctaaaagaatctgcttttaacctt 260
Query: 61 acccacaaagaggaattatttttctcatgctaacattagtttcacatctcaaaattagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acccacaaagaggaattatttttctcatgctaacattagtttcacatctcaaaattagtc 320
Query: 121 agaaagtgatgtgaataagttaatgagattcaagacacaggcaattcaaatgtagtcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaagtgatgtgaataagttaatgagattcaagacacaggcaattcaaatgtagtcctt 380
Query: 181 ttggacagaatgataaagagcttattaggaggaagaaaattgacttatagtctccctaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggacagaatgataaagagcttattaggaggaagaaaattgacttatagtctccctaat 440
Query: 241 ttactgttgaaaactgcatacactagaactaaatttattaagaagaattctgataaacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttactgttgaaaactgcatacactagaactaaatttattaagaagaattctgataaacaa 500
Query: 301 tattgagatgatactatagaataagaaatacgagataaaaaacatgagacccacacaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattgagatgatactatagaataagaaatacgagataaaaaacatgagacccacacaaag 560
Query: 361 atgtgtaagattagatggcccaacaaatttggaatccagaggcttaaaatggcacttatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgtgtaagattagatggcccaacaaatttggaatccagaggcttaaaatggcacttatg 620
Query: 421 agactaagtacatttaaaatacatatactttttagttttatttcctattgctgaaataaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agactaagtacatttaaaatacatatactttttagttttatttcctattgctgaaataaa 680
Query: 481 tatcctgacaaaataatttaagaagtaacttatttggctcaattttttcattatgggaag 540
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 tatcctgaaaaaataatttaagaagtaacttatttggctcaattttt-cattatgggaag 739
Query: 541 gcag 544
||||
Sbjct: 740 gcag 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
