Query= MSMg01no340_b14.b1 MSMg01no340_b14.b1 CHROMAT_FILE:
MSMg01no340_b14.b1 PHD_FILE: MSMg01no340_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:04 2005
(636 letters)
>mm_chr6_12286992_12288027
Length = 1036
Score = 1208 bits (625), Expect = 0.0
Identities = 630/632 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaattatcagggaagaattccttcaaagatttaactcaacactcacccacctct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaattatcagggaagaattccttcaaagatttaactcaacactcacccacctct 264
Query: 65 tcacagtactttaggtcaacggacttgccatcacttcgaacacagtccaacatccttgtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcacagtactttaggtcaacggacttgccatcacttcgaacacagtccaacatccttgtt 324
Query: 125 ttaatgccattcccacaaactgccttctcgctcagctgacacgtactccagtctgaatga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttaatgccattcccacaaactgccttctcgctcagctgacacgtactccagtctgaatga 384
Query: 185 aaaagacccatcagaacagaaggcggtgcatgtaacagacgtcagatgaaactctgatga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaagacccatcagaacagaaggcggtgcatgtaacagacgtcagatgaaactctgatga 444
Query: 245 cctgaatcccatgcctaattcacaactgcttcctaagcccctcaatcaatcatcccacat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cctgaatcccatgcctaattcacaactgcttcctaagcccctcaatcaatcatcccacat 504
Query: 305 gcagagcatatgggtcccagatttgaacatattaggagtcaaatgaaattgctgaggttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcagagcatatgggtcccagatttgaacatattaggagtcaaatgaaattgctgaggttg 564
Query: 365 cacatagcggtggggattattttttgaggcagatgtctactcgacagtcttgacagctag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cacatagcggtggggattattttttgaggcagatgtctactcgacagtcttgacagctag 624
Query: 425 ctatttagtgatattgtaaaaatgacttggtcgcacagatcaataccatgtcaaaacttt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctatttagtgatattgtaaaaatgacttggtcgcacagatcaataccatgtcaaaacttt 684
Query: 485 taaaagaagaatagaaataaaaatgtacaattatgcatcttttagcaaaataattttaat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taaaagaagaatagaaataaaaatgtacaattatgcatcttttagcaaaataattttaat 744
Query: 545 ggatggtgctctatgtagttatattaatactatgtacttcattcatttgcagaaagtana 604
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 745 ggatggtgctctatgtagttatattaatactatgtacttcattcatttgcaggaagtaaa 804
Query: 605 agtctttaaaagtacaaactcattttgtaaat 636
||||||||||||||||||||||||||||||||
Sbjct: 805 agtctttaaaagtacaaactcattttgtaaat 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_b14.g1 MSMg01no340_b14.g1 CHROMAT_FILE:
MSMg01no340_b14.g1 PHD_FILE: MSMg01no340_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:04 2005
(594 letters)
>mm_chr6_12341801_12342792
Length = 992
Score = 1083 bits (560), Expect = 0.0
Identities = 585/594 (98%), Gaps = 2/594 (0%)
Strand = Plus / Minus
Query: 1 atggcagaaactagaatggatagtagaaatacgagttaaagttgaaccgtggactcttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 atggcagaaactagaatggatagtagaaatacgagttaaagttgaaccgtggactcttta 733
Query: 61 agccaatattttcagcttcataatagttccattggtgaaaataattaactctgaaagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 agccaatattttcagcttcataatagttccattggtgaaaataattaactctgaaagaat 673
Query: 121 agctcatttgagcagttgttgtttttataattttgcatggtatatttgacaagtatgagg 180
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 672 agctcatttgagcagttgttgtttatataattttgcatggtatatttgacaagtatgaga 613
Query: 181 agcctaatctaaggttgaaacagatatatcactgtaaaggtggcacagaatggtagataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 agcctaatctaaggttgaaacagatatatcactgtaaaggtggcacagaatggtagataa 553
Query: 241 ttatttgaccaacattccatgaaatgatttgttgttttataggaaacctcagatcaccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ttatttgaccaacattccatgaaatgatttgttgttttataggaaacctcagatcaccaa 493
Query: 301 gatattctatgtatttatataaaaagatggtaataatatttttgattagtatatttcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gatattctatgtatttatataaaaagatggtaataatatttttgattagtatatttcctt 433
Query: 361 tttctctagcctatttacattctaagctttttagttatttcttttaagctaaactattta 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 432 tttctctagcctatttgcattctaagctttttagttatttcttttaagctaaagtattta 373
Query: 421 gattaaaattaatatttctataatttactaactttaaaatttccttctttgcatcagaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gattaaaattaatatttctataatttactaactttaaaatttccttctttgcatcagaaa 313
Query: 481 tttcattatatgaattaaaatatagccattacccttgaacactatactaggactctaaaa 540
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 312 tttcattatgtgaattaaaatatagccattacccttgaacactatactaggacgctaaaa 253
Query: 541 attgatatatatatatattgtgtggcctttatcaaatgatttgcctatactaga 594
|| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 252 atggatatatatatat--tgtgtggcctttatcaaatgatttgcctatactaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 992
Length adjustment: 10
Effective length of query: 584
Effective length of database: 982
Effective search space: 573488
Effective search space used: 573488
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
