Query= MSMg01no340_m22.b1 MSMg01no340_m22.b1 CHROMAT_FILE:
MSMg01no340_m22.b1 PHD_FILE: MSMg01no340_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:53 2005
(500 letters)
>mm_chr6_115073735_115074634
Length = 900
Score = 727 bits (376), Expect = 0.0
Identities = 388/392 (98%)
Strand = Plus / Minus
Query: 109 caaagaagatgagatttaaacataaatttcaaattgacaaacttttttaaaaaaatcatt 168
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 900 caaagaagatgagatttaaacttaaatttcaaattgacaaacttttttaaaaaaatcatt 841
Query: 169 tattatcctgtgtttatgatgtagggggtagcatgagtcagttttctccttccaccttta 228
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tattatcctgtgtctatgatgtagggggtagcatgagtcagttttctccttccaccttta 781
Query: 229 cattttgttctaggaatcaaattcaggtcatcaaactttcatgggcaagcactttaccct 288
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 780 cattttgttctaggaatcaaattcaggtcatcaaactttcatgggcacgcactttaccct 721
Query: 289 ctaaaccatctcactggccctaaattcccaacttcacaaggaagaactgaacattcactg 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ctaaaccatctcactggccctaaattcccaacttcacaaggaagaactgaacattcactg 661
Query: 349 aacccttgcttttcctctaggctatagtgaatggttagaaagtcctgtggattacagaat 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aacccttgcttttcctctaggctatagtgaatggttagaaagtcctgtggattacagaat 601
Query: 409 atggctgtccagagcagctacccctgtgtaatctgtagtgtgtctctaagccttcatctt 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 atggctgtccagagcagctacccctgtgtaatctgtagtgtgtctctaagccttcatctt 541
Query: 469 ggcttggaacataattcttcgtgccttgaagc 500
||||||||||||| ||||||||||||||||||
Sbjct: 540 ggcttggaacatacttcttcgtgccttgaagc 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_m22.g1 MSMg01no340_m22.g1 CHROMAT_FILE:
MSMg01no340_m22.g1 PHD_FILE: MSMg01no340_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:54 2005
(426 letters)
>mm_chr6_114901297_114902122
Length = 826
Score = 789 bits (408), Expect = 0.0
Identities = 419/426 (98%), Gaps = 6/426 (1%)
Strand = Plus / Plus
Query: 1 acagaattctaaaacttatcaattagcataattttgcataaagctcatttgcatagaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagaattctaaaacttatcaattagcataattttgcataaagctcatttgcatagaaaa 260
Query: 61 cagattttcctcaacaactacacaatttgacaatgctaaccccataatccatgaaaagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagattttcctcaacaactacacaatttgacaatgctaaccccataatccatgaaaagtc 320
Query: 121 agttggctggagccactatgtgctggcaaatgaaacctaaataaataaataaataaacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttggctggagccactatgtgctggcaaatgaaacctaaataaataaataaataaacag 380
Query: 181 tctctacaaaaagaaaggaaattcaggcccaggcacttgccacacccaccacggctgacc 240
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 tctctacaaaaagaaaggaaattcaggc------acttgccacacccaccacggctgacc 434
Query: 241 tgagctctctagagcctaactgagacacagccagaaggttgttctccttgttgagctgaa 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 435 tgagctctctagagcctaactgagacacagccagaaggttgttctcattgttgagctgaa 494
Query: 301 ggcggctgtctctgtgcaagaacaccagcctgccccgtgcttctgccccccacccccaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ggcggctgtctctgtgcaagaacaccagcctgccccgtgcttctgccccccacccccaac 554
Query: 361 ccaccagggctggtggagaagatgcatctaacaaagacagcggagagggctggcagatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ccaccagggctggtggagaagatgcatctaacaaagacagcggagagggctggcagatct 614
Query: 421 gattaa 426
||||||
Sbjct: 615 gattaa 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
