TCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAAGTAGAACATATTCAACATGGTGCACTAGACACTAGGAAAACAGT
TGAGTGTTGTTAAAATACATACTTTTGTTAATGAGAAGCTAGGGGAAATA
CAGGAATAAGAATAGGCAGGGTTCAAAAGTAATACTTGGAAAACTCTTAG
GCTTGCATTTGGGGCTTTAATTTGACAATAAGAAAGAAACAGCCCAGAGC
AGCCCAAGGAGGACGAGCAAGTAGGCCACCACACCTAACCCTGCTTTTAC
AGGAGAGCAACCACAGCGTCCACAGTGGTTCTGGTGAGCTTGTTAGGAGG
GAATGTACTCAGTAGATGGGATTTAGAATGCTTGTATTTTCTAACTACTA
GTCCCTCAGCGTTAAGTTAAAACGATAGGTGTCTTTGCCAGTAATTTGAA
CATTTAGAGTAAATTATCAATGCCAAGTAAAATAGTACTTGGCAACGCTT
GTTAAATATGAGAATGAAAACCTGAAAAAATGAAAATTAAAACTTTCCCA
CAAATTTCAAGTCCAGAGATTTATATTGGTGTCTTAGAAACCTTAATGGG
AACATGGCTCATTTGAGGACAGGTTTGCGGTCAGCAGTTACTTTGAAGAC
TGTTCATTTGGCAGTGCCAAAAGTAGTCTCAGCCTGTGTCACATCAGCTA
ACAATCCATTGCTCAAGGCAGCTCAAACAGCCTAGCCAAN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGCACGTGACAGAATCCTGCA
CAGCTTGCGCTCAAGTAAATGCTAGTAAAGCCAAAATCGGAGCGAGGGTG
CGGGCACGGGGACACCGACCCGGCACCCACTGGGAAATTGACTTTACTGA
AGTTAAGCCAGGACTGTATGGGTACAGATATCTCCTAGTGTTTGTGGACA
CATTCTCTGGCTGGATAGAAGCTTTCCCAACCAAACGTGAAACTGCCAAG
GTTGTAACCAAGAAGCTACTAGAAGAAATATTTCCAAGATTTGGAATGCC
CCAGGTATTGGGGACTGATAATGGGCCTGCCTTCATCTCCCAGGTAAGTC
AGTCGGTGGCCAATTTGCTGGGAATTGATTGGAAACTGCATTGTGCTTAC
AGACCCCAGAGTTCAGGTCAGGTAGAAAGAATGAATAGAACAATCAAGGA
GACTTTGACCAAATTAACGCTTGCAGCTGGCACTAGAGACTGGGTACTCC
TACTCCCCTTAGCCCTCTACCGAGCCCGGAATACTCCGGGCCCCCATGGA
CTGACTCCGTATGANATTCTGTATGGGGCACCCCCGCCCCTTGTCAATTT
TCATGATCCTGAAATGTCAAAGTTAACTAATAGTCCCTCTCTCCAAGCTC
ACTTACAGGCCCTCCAAGCAGTACAACGAGAGGTCTGGA

Query= MSMg01no340_p01.b1 MSMg01no340_p01.b1 CHROMAT_FILE:
MSMg01no340_p01.b1 PHD_FILE: MSMg01no340_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:03 2005
         (658 letters)



>mm_chr6_119653327_119654384
          Length = 1058

 Score = 1249 bits (646), Expect = 0.0
 Identities = 652/654 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaagtagaacatattcaacatggtgcactagacactaggaaaacagttgagtgtt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gaattcaagtagaacatattcaacatggtgcactagacactaggaaaacagttgagtgtt 799

                                                                       
Query: 65  gttaaaatacatacttttgttaatgagaagctaggggaaatacaggaataagaataggca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gttaaaatacatacttttgttaatgagaagctaggggaaatacaggaataagaataggca 739

                                                                       
Query: 125 gggttcaaaagtaatacttggaaaactcttaggcttgcatttggggctttaatttgacaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gggttcaaaagtaatacttggaaaactcttaggcttgcatttggggctttaatttgacaa 679

                                                                       
Query: 185 taagaaagaaacagcccagagcagcccaaggaggacgagcaagtaggccaccacacctaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 678 taagaaagaaacagcccagagcagcccaaggaggacgagcaagtaggccacgacacctaa 619

                                                                       
Query: 245 ccctgcttttacaggagagcaaccacagcgtccacagtggttctggtgagcttgttagga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ccctgcttttacaggagagcaaccacagcgtccacagtggttctggtgagcttgttagga 559

                                                                       
Query: 305 gggaatgtactcagtagatgggatttagaatgcttgtattttctaactactagtccctca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gggaatgtactcagtagatgggatttagaatgcttgtattttctaactactagtccctca 499

                                                                       
Query: 365 gcgttaagttaaaacgataggtgtctttgccagtaatttgaacatttagagtaaattatc 424
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gcgttaaattaaaacgataggtgtctttgccagtaatttgaacatttagagtaaattatc 439

                                                                       
Query: 425 aatgccaagtaaaatagtacttggcaacgcttgttaaatatgagaatgaaaacctgaaaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aatgccaagtaaaatagtacttggcaacgcttgttaaatatgagaatgaaaacctgaaaa 379

                                                                       
Query: 485 aatgaaaattaaaactttcccacaaatttcaagtccagagatttatattggtgtcttaga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aatgaaaattaaaactttcccacaaatttcaagtccagagatttatattggtgtcttaga 319

                                                                       
Query: 545 aaccttaatgggaacatggctcatttgaggacaggtttgcggtcagcagttactttgaag 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aaccttaatgggaacatggctcatttgaggacaggtttgcggtcagcagttactttgaag 259

                                                                 
Query: 605 actgttcatttggcagtgccaaaagtagtctcagcctgtgtcacatcagctaac 658
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 actgttcatttggcagtgccaaaagtagtctcagcctgtgtcacatcagctaac 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space:   679104
Effective search space used:   679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)