Query= MSMg01no341_n17.b1 MSMg01no341_n17.b1 CHROMAT_FILE:
MSMg01no341_n17.b1 PHD_FILE: MSMg01no341_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:13 2005
(562 letters)
>mm_chr6_68383457_68384418
Length = 962
Score = 949 bits (491), Expect = 0.0
Identities = 524/535 (97%)
Strand = Plus / Plus
Query: 28 gaattcattgtctatcatgtactcatcattctgttaaactcataatataccctattatta 87
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 228 gaattcattgtctatcatgtactcatcattctggtaaattcataatataccctattatta 287
Query: 88 gccttctgttgagttcattatctatgctgtcctctttttgttgttgagtccattatccac 147
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 288 gccttgtgttgagttcattatctacgctgtcctctttttgttgttgagtccattatccac 347
Query: 148 catatttttgtcttgattcagaactcaggttcatctaaatttttgatgttcctgtcattg 207
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 348 catatttttgtcttgactcagagctcaggttcatctaaatttttgatgttcctgtcattg 407
Query: 208 acactgctatagtcttccatctctaacatcagaacccagattttttggatttccaaagta 267
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tcactgctatagtcttccatctctaacatcagaacccagattttttggatttccaaagta 467
Query: 268 agataaagactaattgttctctaggaagccttaaagtctccagtatcagatgggaactga 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 agataaagactaattgttctctaggaagccttaaagtctccagtatcagatgggaactga 527
Query: 328 taaggcatataaaacaaagaattaatcatatactttattctctggttctctactatgaat 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 taaggcatataaaacaaagaattaatcatatactttattctctggttctctactatgaat 587
Query: 388 acagcataactactatgagcctatattttataccacatggaagaaaatattcttttcatt 447
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 588 acagcataactactatgagcctacattttataccacatggaagaaaatattcttttcatt 647
Query: 448 caagtagaaatggcccttctagaaaataatagtgcagatctaggagacgctgttggctta 507
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 648 caagtagaaatggcccttctagaaaataatagtgcagatctaggagacactgttggctta 707
Query: 508 tcaccacccagattcttgatggcgtgattataaagatccaatctcttgcctgttt 562
|||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 708 tcaccacccagattcttgatggtgtgattataaagatccaatatcttgcctgttt 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_n17.g1 MSMg01no341_n17.g1 CHROMAT_FILE:
MSMg01no341_n17.g1 PHD_FILE: MSMg01no341_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:13 2005
(345 letters)
>mm_chr6_68638863_68639607
Length = 745
Score = 482 bits (249), Expect = e-140
Identities = 321/345 (93%), Gaps = 4/345 (1%)
Strand = Plus / Plus
Query: 1 ctttgagtttctcctgatgttggctctaggcttcctgtaatctatctttattgtgttgac 60
||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||
Sbjct: 201 ctttgagtttctcctgatgttggctctaggcttgttgtaatctatctttattgggtagac 260
Query: 61 acatgtcccttgtattcgtactatcaccaggacttgtatcatgaaagattgttggaattt 120
| ||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatgccccttgtgttcgtaatatcaccaggacttgtatcatgaaagattgttggaattt 320
Query: 121 tgtgaaagatattatttagtacatttactgagctgtttatgtaagctttttt-cttttag 179
||||||| || ||| ||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 321 tgtgaaaaatcttacttagtacatttactgagatgtttatgtaagctttttttcttttag 380
Query: 180 ttatttaatattgtaaattatacttttcaaattatatataccaaaacatccctattatgt 239
|| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 tt-tttaatatggtaaattatacttatcaaattatatataccaaaacatccctattatgt 439
Query: 240 taccttaaattcatcaaaataataattatttataagaagtctcatgttatgaagcaatct 299
||||||| ||||| |||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 440 taccttacattcaccaaaataataattattcataaaaagtctcatgttatgaagcaatct 499
Query: 300 gttatagaaatgccttcaa-atatcatattaacaaaattgtcagg 343
||||||||||||||||||| | ||||||| ||||||||| |||||
Sbjct: 500 gttatagaaatgccttcaaca-atcatataaacaaaattttcagg 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
