MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-343J14
Chromosome	6 (Build37)
Map Location	140,911,393 - 140,911,749
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Pik3c2g, Plcz1, Capza3, LOC100042680, LOC100039020, LOC269810, Plekha5, Aebp2, EG664868
Downstream gene	LOC664875, Pde3a, Slco1c1, Slco1b2, EG435927, Slco1a4, LOC100042750, EG664913, Slco1a1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pik3c2g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18705 MGI:1203730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Plcz1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114875 MGI:2150308
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Capza3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12344 MGI:106221
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042680 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042680
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100039020 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039020
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein

name	LOC269810 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:269810
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 91 ESTs, 5 Proteins pseudo : _no_value

name	Plekha5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109135 MGI:1923802
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aebp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11569 MGI:1338038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	EG664868 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664868 MGI:3646625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 469 ESTs, 4 Proteins

name	LOC664875 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 69 ESTs, 6 Proteins pseudo : _no_value

name	Pde3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54611 MGI:1860764
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slco1c1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58807 MGI:1889679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slco1b2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28253 MGI:1351899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG435927 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435927 MGI:3643685
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins

name	Slco1a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28250 MGI:1351896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042750 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042750
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	EG664913 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664913 MGI:3644299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Slco1a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28248 MGI:1351891
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pik3c2g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46849778 GeneID:18705 MGI:1203730
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide transcript_id : NM_207683.2

name	Pik3c2g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755059 GeneID:18705 MGI:1203730
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide transcript_id : NM_011084.1

name	Plcz1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374644 GeneID:114875 MGI:2150308
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase C, zeta 1 transcript_id : NM_054066.3

name	Capza3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802827 GeneID:12344 MGI:106221
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : capping protein (actin filament) muscle Z-line, alpha 3 transcript_id : NM_007605.3

name	LOC100042680 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149256025 GeneID:100042680
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100042680 transcript_id : XM_001478651.1

name	LOC100039020 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149256017 GeneID:100039020
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : similar to reproductive homeobox on X chromosome 8 transcript_id : XM_001472100.1

name	Plekha5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110835705 GeneID:109135 MGI:1923802
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain containing, family A member 5 transcript_id : NM_144920.3

name	Aebp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130635 GeneID:11569 MGI:1338038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : AE binding protein 2 transcript_id : NM_178803.2

name	Aebp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54112426 GeneID:11569 MGI:1338038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : AE binding protein 2 transcript_id : NM_001005605.1

name	Aebp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86277300 GeneID:11569 MGI:1338038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : AE binding protein 2 transcript_id : NM_009637.3

name	EG664868 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378321 GeneID:664868 MGI:3646625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 469 ESTs, 4 Proteins product : predicted gene, EG664868 transcript_id : XM_973154.1

name	Pde3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9055303 GeneID:54611 MGI:1860764
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 3A, cGMP inhibited transcript_id : NM_018779.1

name	Slco1c1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946865 GeneID:58807 MGI:1889679
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 1c1 transcript_id : NM_021471.1

name	Slco1b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14547898 GeneID:28253 MGI:1351899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 1b2 transcript_id : NM_020495.1

name	Slco1b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130560 GeneID:28253 MGI:1351899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 1b2 transcript_id : NM_178235.2

name	EG435927 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149256028 GeneID:435927 MGI:3643685
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins product : predicted gene, EG435927 transcript_id : XM_973315.2

name	Slco1a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13507613 GeneID:28250 MGI:1351896
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 1a4 transcript_id : NM_030687.1

name	LOC100042750 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149256030 GeneID:100042750
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to ERV-BabFcenv provirus ancestral Env polyprotein precursor (Envelope polyprotein) (BabFcenv) transcript_id : XM_001478749.1

name	EG664913 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378325 GeneID:664913 MGI:3644299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG664913 transcript_id : XM_973397.1

name	Slco1a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803170 GeneID:28248 MGI:1351891
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 1a1 transcript_id : NM_013797.2

name	Pik3c2g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46810282 GeneID:18705 MGI:1203730
definition	EC_number : 2.7.1.154 GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005942 - phosphoinositide 3-kinase complex [Evidence IEA] GO_function : GO:0004428 - inositol or phosphatidylinositol kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016303 - phosphatidylinositol 3-kinase activity [Evidence IEA]; GO:0035005 - phosphatidylinositol-4-phosphate 3-kinase activity [Evidence IEA]; GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : isoform 1 is encoded by transcript variant 1; phosphoinositide 3-Kinase-C2-gamma product : phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide isoform 1 protein_id : NP_997566.1

name	Pik3c2g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755060 GeneID:18705 MGI:1203730
definition	EC_number : 2.7.1.154 GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005942 - phosphoinositide 3-kinase complex [Evidence IEA] GO_function : GO:0004428 - inositol or phosphatidylinositol kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016303 - phosphatidylinositol 3-kinase activity [Evidence IEA]; GO:0035005 - phosphatidylinositol-4-phosphate 3-kinase activity [Evidence IEA]; GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; phosphoinositide 3-Kinase-C2-gamma product : phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide isoform 2 protein_id : NP_035214.1

name	Plcz1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22550102 CCDS:CCDS20671.1 GeneID:114875 MGI:2150308
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004435 - phosphoinositide phospholipase C activity [Evidence IEA]; GO:0004629 - phospholipase C activity [Evidence IDA] GO_process : GO:0006816 - calcium ion transport [Evidence IDA]; GO:0007343 - egg activation [Evidence IDA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 function : IP3 production upon hydrolysis of PIP2 substrate note : phospholipase C zeta product : phospholipase C, zeta 1 protein_id : NP_473407.2

name	Capza3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982480 CCDS:CCDS20672.1 GeneID:12344 MGI:106221
definition	GO_component : GO:0008290 - F-actin capping protein complex [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IEA]; GO:0051016 - barbed-end actin filament capping [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cp alpha3; capping protein alpha 3 product : capping protein (actin filament) muscle Z-line, alpha 3 protein_id : NP_031631.2

name	LOC100042680 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149256026 GeneID:100042680
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478701.1

name	LOC100039020 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149256018 GeneID:100039020
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472150.1

name	Plekha5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110835706 GeneID:109135 MGI:1923802
definition	codon_start : 1 note : Gt(Ayu21)9Imeg product : phosphoinositol 3-phosphate-binding protein-2 protein_id : NP_659169.3

name	Aebp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54112427 CCDS:CCDS20673.1 GeneID:11569 MGI:1338038
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003714 - transcription corepressor activity [Evidence IMP] [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : AE binding protein 2 isoform 1 protein_id : NP_001005605.1

name	Aebp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753000 GeneID:11569 MGI:1338038
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003714 - transcription corepressor activity [Evidence IMP] [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : AE binding protein 2 isoform 3 protein_id : NP_033767.1

name	Aebp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54112425 CCDS:CCDS20674.1 GeneID:11569 MGI:1338038
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003714 - transcription corepressor activity [Evidence IMP] [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : AE binding protein 2 isoform 2 protein_id : NP_848918.1

name	EG664868 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378322 GeneID:664868 MGI:3646625
definition	codon_start : 1 product : similar to ribosomal protein L38 protein_id : XP_978248.1

name	Pde3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055304 CCDS:CCDS20676.1 GeneID:54611 MGI:1860764
definition	GO_function : GO:0004119 - cGMP-inhibited cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 function : hydrolysis of cAMP and cGMP note : cGMP-inhibited phosphodiesterase product : phosphodiesterase 3A, cGMP inhibited protein_id : NP_061249.1

name	Slco1c1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946866 CCDS:CCDS20677.1 GeneID:58807 MGI:1889679
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : solute carrier family 21 (organic anion transporter), member 14 product : solute carrier organic anion transporter family, member 1c1 protein_id : NP_067446.1

name	Slco1b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14547899 CCDS:CCDS20678.1 GeneID:28253 MGI:1351899
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008514 - organic anion transporter activity [Evidence ISS]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; liver-specific organic anion transporter 1; liver-specific organic anion transporter; solute carrier family (organic anion transporter) member 10; solute carrier family 21 (organic anion transporter), member 6; solute carrier family 21 (organic anion transporter), member 10 product : solute carrier organic anion transporter family, member 1b2 isoform 1 protein_id : NP_065241.1

name	Slco1b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30102937 CCDS:CCDS20679.1 GeneID:28253 MGI:1351899
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008514 - organic anion transporter activity [Evidence ISS]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; liver-specific organic anion transporter 1; liver-specific organic anion transporter; solute carrier family (organic anion transporter) member 10; solute carrier family 21 (organic anion transporter), member 6; solute carrier family 21 (organic anion transporter), member 10 product : solute carrier organic anion transporter family, member 1b2 isoform 2 protein_id : NP_839953.1

name	EG435927 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149256029 GeneID:435927 MGI:3643685
definition	codon_start : 1 product : similar to organic anion transporting polypeptide 2 protein_id : XP_978409.2

name	Slco1a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507614 GeneID:28250 MGI:1351896
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008514 - organic anion transporter activity [Evidence IDA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : organic anion transporting polypeptide 2; solute carrier family 21 (organic anion transporter), member 5 product : solute carrier organic anion transporter family, member 1a4 protein_id : NP_109612.1

name	LOC100042750 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149256031 GeneID:100042750
definition	codon_start : 1 product : similar to ERV-BabFcenv provirus ancestral Env polyprotein precursor (Envelope polyprotein) (BabFcenv) protein_id : XP_001478799.1

name	EG664913 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378326 GeneID:664913 MGI:3644299
definition	codon_start : 1 product : hypothetical protein protein_id : XP_978491.1

name	Slco1a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305497 GeneID:28248 MGI:1351891
definition	GO_component : GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IDA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008514 - organic anion transporter activity [Evidence IDA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0015711 - organic anion transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 function : mediates transport of organic solutes note : solute carrier family 21 (organic anion transporter), member 1 product : solute carrier organic anion transporter family, member 1a1 protein_id : NP_038825.1

name	(CDS detail)
type	STS
link
xref	UniSTS:163403
definition	standard_name : AB008791

name	(CDS detail)
type	STS
link
xref	UniSTS:124114
definition	standard_name : 34.MMHAP87FRD10.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:124074
definition	standard_name : 34.MMHAP18FLD4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:178570
definition	standard_name : AW495282

name	(CDS detail)
type	STS
link
xref	UniSTS:130841
definition	standard_name : D6Mit292.2

name	(CDS detail)
type	STS
link
xref	UniSTS:130840
definition	standard_name : D6Mit292

name	(CDS detail)
type	STS
link
xref	UniSTS:142585
definition	standard_name : D6Mit292

name	(CDS detail)
type	STS
link
xref	UniSTS:125483
definition	standard_name : MT445

name	(CDS detail)
type	STS
link
xref	UniSTS:159583
definition	standard_name : AI428202

name	(CDS detail)
type	STS
link
xref	UniSTS:235569
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:123230
definition	standard_name : 14.MMHAP6FLE2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:165495
definition	standard_name : AI586002

name	(CDS detail)
type	STS
link
xref	UniSTS:224771
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:123705
definition	standard_name : 25.MMHAP94FLA4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123949
definition	standard_name : 31.MMHAP63FLC4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:235570
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179486
definition	standard_name : C87899

name	(CDS detail)
type	STS
link
xref	UniSTS:208045
definition	standard_name : BB361933

name	(CDS detail)
type	STS
link
xref	UniSTS:225370
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130655
definition	standard_name : D6Mit112

name	(CDS detail)
type	STS
link
xref	UniSTS:165496
definition	standard_name : AI785519

name	(CDS detail)
type	STS
link
xref	UniSTS:164342
definition	standard_name : AI790453

name	(CDS detail)
type	STS
link
xref	UniSTS:130680
definition	standard_name : D6Mit136

name	LOC269810 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149256027 GeneID:269810
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 91 ESTs, 5 Proteins product : similar to ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d pseudo : _no_value transcript_id : XR_033820.1

name	LOC664875 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149256019 GeneID:664875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 69 ESTs, 6 Proteins product : similar to putative ribosomal protein L11 protein pseudo : _no_value transcript_id : XR_030598.1

clone name	MSMg01-509I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-423J15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-472P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060L23
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-343J14.T7 (MSMg01no343_j14.b1)	MSMg01-343J14.TJ (MSMg01no343_j14.g1)
ACC	AG456869	AG456870
length	892	800
length of high quality (start - end)	94 (58 - 151)	357 (64 - 420)
definition	CHROMAT_FILE: MSMg01no343_j14.b1 PHD_FILE: MSMg01no343_j14.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:33:29 2005	CHROMAT_FILE: MSMg01no343_j14.g1 PHD_FILE: MSMg01no343_j14.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:33:30 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	GCCGCTATACGACTCCTATAGTGCGAGGATCCGCGGAATTCTTTCATATG TCCCAAAACCACAAGAAACACTGTGATAAGAATGTGTGTGTGTGTGCGTG TATATATATATGTGAGTGTGTATATATATAACACAATGTTTTTAATACCA AAGTCAGGTGGTCTTTTGCTTATGCTTAAAATTTACCAGGCATTGCTATT CCTGCTGTTAACACTTAAGTGCCTTTTATTGCCTGTTGCATGATCTCCTG CTAATTCTTTCATATAATGTCTACCTGCCCCATATGTTTATTCTATGCCT GTGTGCTTTTTTTGCACCTGCGATGCTTCTCCCTCTTTCTTATTATCATC CTTTCCCCCCCTTCCATTTTATCCTTAATATTCCCTTCCTCCTTTATCAC TTTCTATTTTTCTCCCCCCCCCCCCCCTCCTTATTTTATCTTCTTCTTAT TCTCTCTTCACCTTTCCCCCTCACTATTTCCTCTCTTCACCTCTCTTATT CATATCCTCATCCCATTATTTTACATACATCCTTTCTACTATCCCTCTTC TCTCTCTCCTCTTTCCTCCACTTCAAACTCATATTTCCTTCATATCCCCA TCTCCCTTTTTGACCCTTACCCTTACCACTCTATTATTCTTAACTCCCTC CTTCTTTCTCCTTCTTCATCCTCTCATAGTTATTCATCCACTCCTTTGCG TTTTAACTTCTCTTCCACTTTTCCCACCATTCTCCTCCTCCTTTTCTTTT ATACATTTTCTTTTCTCACTCACTCTCTCATAATTATCTTCCATTCTCTC TACCTCCCTCTCATACTTTCCTTCCTATTTCTCCTTCCTCTCCCCTCTTC TATTCGTCCACCNTCCTTCCTCTCTTACTTCACTACTACCCN	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXTTTAGAGCTCACGGCTGGGTGCTGTATGCTCTGACTG CAGCCTTTCTACACAGTCACCAGCTTTCGAGGTGAGTGTGCTGCTCTGTC AGTGAGAGGAGAATGTAGGTCATCGCCATAATTGGCTAGCTTTTAATAAA GAGAAGATACTTATTATTTTATGATGAAATAACATAATTGTAGATGGCTT TATTGAGTAGCAGGGAGAAGCTGAGATCAATATGGGGCTAAAAGCCAATC AATAGTACCCTAGTACTCTGAACATGCCTCAAATCTGTTTTCTAAATCAC CTCTAAGAGCAAATCTCTAATTCTAAATTAGGTCTCCAAATCCCGTTCTA GGCAGCTCCTTCCCCCCAGCCTTCCAGCTCCAGTTTGAATTTTCTCATGG CCATTCTTGTGAAGAATATTTGAACTTCCGTGCGCTGCTCCCTAAACCTT AAGTTGCCCACCTTTCTTGTTGTATTTTTTTCCCGCCCCCTTTGATTGTA AATTATTTCTTTTTCCCCCTTTTATTTTCTCTCTTCCCTCCTTTTTTACA TTTCTTCCTCCTTCTTTTTTTGTTTTTCGTTTCCCTCCTCTCTTTTTTTT TATTTTTTCCTCCCCTTCTTTCCCCTCCCCTTTCCCTTCACTATCTTCCC CTCTTTCTCTCTTCCCTTTTCCTCTCCCATTCTCTATTACCATTCTCCCC TTATTTTTTTTCCTCTTTCTTCCCTCCTCCCTTTCCTTTTACCTTTCCCT
quality values	Open. Hide. 14 14 14 23 12 9 9 10 10 23 25 27 21 11 12 12 24 19 15 9 9 9 9 9 9 9 10 10 16 18 22 25 59 59 43 21 17 17 19 27 25 43 33 33 30 27 16 13 8 8 8 8 10 10 13 12 17 22 29 24 25 30 30 30 33 41 37 41 48 47 47 47 48 42 42 42 43 43 47 43 37 37 37 40 42 48 48 57 57 57 57 54 54 54 59 59 59 59 59 57 57 57 57 68 68 68 68 68 54 54 57 57 57 57 57 44 44 37 44 44 37 37 43 43 48 57 57 59 57 57 54 47 57 57 57 57 57 48 48 48 57 48 48 48 44 42 36 24 27 20 24 24 25 25 18 21 12 12 12 12 11 20 13 26 24 42 32 36 25 25 28 37 36 47 47 37 36 25 25 28 23 32 24 30 30 23 21 11 11 15 18 18 19 19 19 23 34 34 39 36 36 37 37 28 23 23 20 18 30 18 18 18 30 19 23 21 15 11 11 11 11 13 15 23 28 30 37 37 37 19 21 11 11 11 13 12 12 12 12 14 18 13 10 10 8 10 9 13 15 16 14 15 9 8 8 6 6 15 13 18 12 11 10 10 10 9 9 9 9 9 10 11 11 16 21 28 31 20 20 15 21 12 12 10 15 10 9 8 8 8 8 8 8 10 13 13 21 17 11 10 9 9 8 8 8 8 8 8 12 23 26 22 8 8 8 8 8 10 11 9 9 9 9 9 10 9 8 8 12 10 8 8 8 12 12 8 8 12 11 14 8 10 8 8 9 9 11 11 11 22 17 13 11 11 11 13 19 30 14 12 10 10 10 8 9 9 9 14 18 10 10 8 8 8 8 8 8 12 14 12 12 14 14 18 19 16 14 14 12 12 8 8 8 9 9 11 11 8 8 11 13 10 12 12 10 9 13 14 12 10 9 9 8 11 16 19 30 30 22 10 10 8 8 12 10 11 11 10 11 8 8 8 8 8 8 10 8 8 8 9 9 9 9 8 8 8 8 8 8 8 10 8 10 8 8 8 8 8 10 15 14 14 10 8 8 8 8 7 8 8 8 8 8 8 8 8 8 8 13 13 9 9 19 16 14 13 10 8 8 8 8 8 8 8 8 11 10 8 8 8 8 9 9 9 9 9 13 13 8 8 8 8 8 8 6 6 6 6 8 10 10 8 7 7 10 8 8 8 10 9 8 8 8 8 8 12 10 9 9 10 10 15 13 10 10 10 10 9 10 10 10 10 8 10 11 11 11 19 17 17 21 18 18 12 8 8 8 13 8 8 8 6 6 6 6 8 6 6 10 8 8 8 11 11 11 12 10 10 11 12 10 11 10 9 9 11 13 8 8 8 8 13 10 10 8 8 15 10 10 13 8 8 6 6 8 10 10 8 6 6 8 10 10 10 10 10 10 8 8 8 8 8 8 8 9 9 9 9 8 13 7 9 10 8 8 8 8 8 8 8 8 8 12 10 8 8 8 12 11 15 8 8 8 8 8 10 8 8 8 10 15 11 8 8 8 8 8 8 10 12 10 8 8 6 6 6 7 8 7 7 8 8 19 21 15 13 8 8 10 9 9 8 10 6 6 6 6 8 15 15 19 19 15 15 8 10 10 10 10 12 9 11 10 8 8 6 6 6 6 6 6 12 15 23 21 21 21 18 18 14 18 14 14 10 8 10 8 10 8 9 9 10 8 6 6 8 8 10 9 9 9 9 8 10 10 8 8 7 7 8 8 10 8 8 8 10 8 11 10 8 8 8 7 7 7 7 8 8 10 8 8 11 8 8 8 9 9 13 8 10 10 10 12 8 7 7 8 15 17 15 13 9 10 10 18 11 10 10 10 10 10 13 12 8 6 6 6 6 15 13 9 9 7 8 8 11 8 8 6 6 8 8 8 8 8 8 8 8 11 10 10 12 10 10 8 6 6 10 6 8 8 3 0 3 7 8 8 8 8 7 9 7 11 10 10 9 9 8 10 6 6 6 6 8 8 8 8 8 8 8 3 0	Open. Hide. 9 9 9 9 20 22 30 28 28 19 14 17 17 15 19 30 28 21 12 12 9 9 11 11 11 11 11 13 14 19 25 32 41 37 34 32 30 30 28 36 33 33 43 48 48 50 57 41 33 21 23 19 24 28 28 30 34 24 32 28 28 36 42 48 54 57 59 68 68 68 48 68 68 54 50 50 57 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 48 47 47 50 46 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 50 50 50 68 68 68 68 68 68 68 68 57 68 68 68 68 57 57 57 57 57 57 57 57 57 57 30 57 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 62 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 59 59 57 59 59 68 68 68 68 57 57 52 52 52 52 57 57 57 57 57 57 57 57 57 57 68 68 68 68 59 59 68 59 59 54 57 57 59 57 57 57 57 68 68 68 68 68 68 68 68 68 59 59 59 57 44 41 32 18 18 22 32 40 59 59 68 68 68 68 57 57 57 57 57 57 57 57 54 54 59 57 57 57 48 48 48 59 59 68 68 68 68 59 59 57 57 57 59 59 59 47 47 43 43 43 47 43 48 48 57 59 59 59 59 57 50 48 48 48 48 46 41 41 41 40 39 32 28 28 37 37 39 39 36 39 39 41 43 41 37 37 41 41 37 43 39 33 33 28 32 22 20 11 11 11 10 10 11 12 29 30 30 26 15 14 14 26 22 23 15 13 10 16 12 14 14 27 27 18 18 16 16 16 16 30 33 37 30 30 29 15 16 11 10 8 7 6 6 10 8 8 8 18 20 28 12 15 8 8 8 10 10 8 9 8 13 20 23 20 17 13 8 8 8 12 8 8 8 8 9 9 8 11 8 10 8 8 8 10 10 10 10 16 17 28 31 28 29 16 16 11 13 15 18 17 9 10 8 8 8 10 10 10 19 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 10 10 10 9 6 10 6 6 8 8 8 8 8 8 9 9 9 9 8 8 8 8 8 8 17 19 22 14 10 11 10 11 10 12 8 8 6 6 8 10 10 11 8 8 6 6 8 8 15 8 8 6 6 8 8 10 11 9 8 8 8 8 8 8 8 8 10 10 10 12 12 10 10 12 12 10 10 10 10 13 13 17 13 13 9 9 8 9 11 11 11 11 11 11 15 15 19 16 18 8 8 8 8 6 6 8 8 10 16 15 11 10 10 15 8 8 8 8 10 12 12 8 8 10 15 13 8 9 9 9 9 9 8 8 8 8 10 10 12 9 11 11 13 23 27 34 23 15 10 8 8 10 8 9 8 10 8 8 10 8 10 11 10 10 10 10 10 12 10 10 6 6 8 8 8 8 8 8 8 8 10 13 19 21 15 18 15 10 10 10 8 8 6 6 8 8 8 8 8 10 12 10 10 10 10 10 12 11 19 24 19 17 10 8 8 8 8 9 9 9 12 12 11 14 8 8 8 12 13 15 11 10 10 8 8 9 10 11 10 10 8 8 8 8 8 15 10 12 11 9 9 11 11 11 13 13 19 8 15 11 8 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no343_j14.g1 MSMg01no343_j14.g1 CHROMAT_FILE:
MSMg01no343_j14.g1 PHD_FILE: MSMg01no343_j14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:30 2005
         (357 letters)



>mm_chr6_140911193_140911949
          Length = 757

 Score =  690 bits (357), Expect = 0.0
 Identities = 357/357 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttagagctcacggctgggtgctgtatgctctgactgcagcctttctacacagtcaccag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tttagagctcacggctgggtgctgtatgctctgactgcagcctttctacacagtcaccag 498

                                                                       
Query: 61  ctttcgaggtgagtgtgctgctctgtcagtgagaggagaatgtaggtcatcgccataatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ctttcgaggtgagtgtgctgctctgtcagtgagaggagaatgtaggtcatcgccataatt 438

                                                                       
Query: 121 ggctagcttttaataaagagaagatacttattattttatgatgaaataacataattgtag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ggctagcttttaataaagagaagatacttattattttatgatgaaataacataattgtag 378

                                                                       
Query: 181 atggctttattgagtagcagggagaagctgagatcaatatggggctaaaagccaatcaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atggctttattgagtagcagggagaagctgagatcaatatggggctaaaagccaatcaat 318

                                                                       
Query: 241 agtaccctagtactctgaacatgcctcaaatctgttttctaaatcacctctaagagcaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 agtaccctagtactctgaacatgcctcaaatctgttttctaaatcacctctaagagcaaa 258

                                                                    
Query: 301 tctctaattctaaattaggtctccaaatcccgttctaggcagctccttccccccagc 357
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tctctaattctaaattaggtctccaaatcccgttctaggcagctccttccccccagc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 757
Length adjustment: 9
Effective length of query: 348
Effective length of database: 748
Effective search space:   260304
Effective search space used:   260304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information