TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCATTTATATTTCACTTGTTTGCTAATCTCTAGGCTTTTATTAATA
AATGTTATTAATTTGCTTTTCTTCTTACACAGTTCATATTTGGAGAGTGT
AGACTGGTCTGTACTAGCCAAACTTAACCAAGCAAGCAAACCACTAAATT
CTGCAACACAAATTACAATGAACAATGTGCTAATTGAGAGTAATGACTGA
GTCACCCTCTTTGCCTGGAGAATGTAGTCATTTGAGGCAGCAGCAACCAG
AATACATAATCCAGATGCAAGTAGCCTATATCAAGAGGGGCCAGGGTTTA
AAAGAAAATAGAATACTCACAGAACAAGTAGGAGATTTCTGGAACAATTC
AACACTCAGTCAGTATTTCTTTGGTACTCTCTTTTCCCTAAGTACAATGT
CTTACAACCTTGAAGATACGAATTATTCGTTTTTCTTACAACTTTGTGTC
GTAATTTGAACACTTCTCAGCAAATTTCCTTGGTACATAAGATGTAGTTG
TGGCTTGAATGTGAAATGTCTCCCATAGTCTCAAATATCTGAACACATGG
TCCTCAGTTGAAGATGTTGTTTGGAGAAATTTTGGAAATGTGGCCTTGCT
TGAAAAAAAAATCATGGGGTCAAAAAACAAAAAAAAAACCCTGCCACTTC
AAATTTTCTCCCTGCCCAAAAAACGCTCAAGGGGTAATAGTGGCTTC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCAGAGACTAAGTCATAAACAAAGGAGTACACA
AGACTGCATATATAGCAGAGAATGGCCTTTTCGTGCATCAATGGAAGGAG
ATATCCCATGAGACAGGCATGCTGATCTCAGTATTCAAGGTCAATCTACA
GAGCAAGAACCAGGATAGTCAAGCTTAAGTAGTGAAGGATTTAGAAAACA
TAAAGCCAGTGATAATGTAATAGTACAAGGGGATCATGTTCTAGTTCCTG
TAAGCAGCAGAACTGGGCAGCTTCAGACATGTGGCTCTGACTCTAGAGTT
AAGAATGGAAGGAACTACTGGGGCAATTGATGCTGGTTAGCTGGAGCTAA
GACATTAGCAATGATTAGGAAGAGACCAGCATGACTGAGTTGAAATCTGG
GAGTTGTTTTCTGGGAGCACAAAGAAGCTGTGTTCCAGAAACAGCCAAGG
TTGTACCTCTTGCTGCAGCTGGACTTAGTAATGTGTAAGAGTCACCCAGG
TGGTACTGGTTTTGAAAGCATGAAAGTGTCATGAAAAACAGCTGAAGCTT
GGCACTGTGAAAAATCATGGAAAGGCATTTGGAAAAGGGGAATCCTAACT
GAAGTTGAAGGCCCAGAACTGAAGGGTCAGGCCAAAGAATTGAAGCTTGG
CCCCTTGAAAAAACTTACCAAAGGTTTTGTGGGAACCTCTATTGGAGGGG
GAAACCCCCT

Query= MSMg01no344_e21.b1 MSMg01no344_e21.b1 CHROMAT_FILE:
MSMg01no344_e21.b1 PHD_FILE: MSMg01no344_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:26 2005
         (486 letters)



>mm_chr6_81010674_81011554
          Length = 881

 Score =  870 bits (450), Expect = 0.0
 Identities = 474/484 (97%), Gaps = 5/484 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   cggaattccatttatatttcacttgtttgctaatctctaggcttttattaataaatgtta 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cggaattccatttatatttcacttgtttgctaatctctaggcttttattaataaatgtta 622

                                                                       
Query: 63  ttaatttgcttttcttcttacacagttcatatttggagagtgtagactggtctgtactag 122
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 621 ttaatttgcttttcttcttacacagttcacatttggagagtgtagactggtctgtactag 562

                                                                       
Query: 123 ccaaacttaaccaagcaagcaaaccactaaattctgcaacacaaattacaatgaacaatg 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccaaacttaaccaagcaagcaaaccactaaattctgcaacacaaattacaatgaacaatg 502

                                                                       
Query: 183 tgctaattgagagtaatgactgagtcaccctctttgcctggagaatgtagtcatttgagg 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgctaattgagagtaatgactgagtcaccctctttgcctggagaatgtagtcatttgagg 442

                                                                       
Query: 243 cagcagcaaccagaatacataatccagatgcaagtagcctatatcaagaggggccagggt 302
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 cagcagcaaccagaatacataatccagatgcaagtagcctatatcaagaggggccagg-t 383

                                                                       
Query: 303 ttaaaagaaaatagaatactcacagaacaagtaggagatttctggaacaattcaacactc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttaaaagaaaatagaatactcacagaacaagtaggagatttctggaacaattcaacactc 323

                                                                       
Query: 363 agtcagtatttctttggtactctcttttccctaagtacaatgtcttacaaccttgaagat 422
           |||    |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 322 agt----atttctttggtactctcttttccctaagtacaatgtcttacaactttgaagat 267

                                                                       
Query: 423 acgaattattcgtttttcttacaactttgtgtcgtaatttgaacacttctcagcaaattt 482
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 266 gcgaattattcgtttttcttacaactttgtgtcgtaacttgaacacttctcagcaagttt 207

               
Query: 483 cctt 486
           ||||
Sbjct: 206 cctt 203


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 881
Length adjustment: 10
Effective length of query: 476
Effective length of database: 871
Effective search space:   414596
Effective search space used:   414596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)