Query= MSMg01no344_i22.b1 MSMg01no344_i22.b1 CHROMAT_FILE:
MSMg01no344_i22.b1 PHD_FILE: MSMg01no344_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:47 2005
(461 letters)
>mm_chr6_37063380_37064240
Length = 861
Score = 855 bits (442), Expect = 0.0
Identities = 454/458 (99%)
Strand = Plus / Minus
Query: 4 ggaattcatgtggtatctctcgagtaaagtccctcagggaagccttgtactacagtcttg 63
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggaattcatgtggtagctttcgagtaaagtccctcagggaagccttgtactacagtcttg 602
Query: 64 tcctgtttaatgttcagaatattctctgaaaaaaaaaagtaattaggcaagttcattatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcctgtttaatgttcagaatattctctgaaaaaaaaaagtaattaggcaagttcattatt 542
Query: 124 gtgtaaacaccaaagaatgtgcttatgcaaacatgtggtgtaggctactgtacgttatag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtgtaaacaccaaagaatgtgcttatgcaaacatgtggtgtaggctactgtacgttatag 482
Query: 184 gaaaacacatggtgtatgtgaggtctgttaatggcgaaaatattctttactctgggaatg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaaaacacatggtgtatgtgaggtctgttaatggcgaaaatattctttactctgggaatg 422
Query: 244 tactaaaatattaactatgccagcataaatcagtttcaaagggtgagaaatgcaatataa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tactaaaatattaactatgccagcataaatcagtttcaaagggtgagaaatgcaatataa 362
Query: 304 gaacaaagtgttgagctacatattcgtgtttctccatcccaaagaagaaccctctgctgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaacaaagtgttgagctacatattcgtgtttctccatcccaaagaagaaccctctgctgt 302
Query: 364 tctagtggtagcatctcctgatatggaggaagaccgaattggacgctgctctttctaact 423
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 301 tctagtggtagcatctcctgatatggaggaagaccggattggacgctgccctttctaact 242
Query: 424 accgtcaggtatctggtcctcaccaaattgctttctgg 461
||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accgtcaggtatctggtcctcaccaaattgctttctgg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_i22.g1 MSMg01no344_i22.g1 CHROMAT_FILE:
MSMg01no344_i22.g1 PHD_FILE: MSMg01no344_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:47 2005
(537 letters)
>mm_chr6_36917208_36918144
Length = 937
Score = 932 bits (482), Expect = 0.0
Identities = 521/536 (97%), Gaps = 4/536 (0%)
Strand = Plus / Plus
Query: 1 atagctgaatagacgtggttgaatggaagtctttgttggcgtgtctttgataagaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagctgaatagacgtggttgaatggaagtctttgttggcgtgtctttgataagaatatt 260
Query: 61 ttgtctctggatccttctcccctctggctttctgctttctggcttccacaacatgagtgg 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcgtctctggatccttctcccctctggctttctgctttctggcttccacaacatgagtgg 320
Query: 121 ctctgatccagctcactgtctctgacacagtgctctgcctcagccaactgcacactgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctgatccagctcactgtctctgacacagtgctctgcctcagccaactgcacactgagc 380
Query: 181 actcttaacccaggagccaaataaatcctcccaccctaagatttttttcactccgccatt 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 actcttaacccaggagccaaataaatcctcccatcctaagatttttttcactccgccatt 440
Query: 241 ttgtcttaaggtttagcaaccaaagctaatcaagctaccaaggtgactttatcagggatg 300
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 441 ttgtcttaaggtttagcaaccaaagctaatcaagccaccaaggtgacattatcagggatg 500
Query: 301 tcacgtagttatcagatgagtcctaaggtaatgggccagcctttaaaaattgttagtaag 360
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 tcaggtagttatcagatgagtcctaaggtaatgggccagcctttaaaagttgttagtaag 560
Query: 361 aacataaattattgaaatatggaaattcttcagaaaattgaagtataattactgtgtgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacataaattattgaaatatggaaattcttcagaaaattgaagtataattactgtgtgac 620
Query: 421 ccagacataccacctctgtccatgcttacagaacgaagtctaggttgaccaccacaaaca 480
||||||||||||||||| |||||||| |||||| ||||||||||||||||||| |||||
Sbjct: 621 tcagacataccacctctgaccatgctttcagaacaaagtctaggttgaccaccataaaca 680
Query: 481 cacacacacacacacacacacacacacacacacacacacacactccccaaaaaaga 536
||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 681 cacacacacacacacacacacacacacacacacacacac----tccccaaaaaaga 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
