XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCACC
TGATGACTACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCT
TAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACA
CCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCG
TGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGC
TTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGAC
ATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGA
AGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAG
CCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACA
GAGGAATGAATACAGAAAATGGGGTACATCTACCACATGGGAGGACTAAT
CAGCTTTTTATAAGAATGAATTTATGAAATTCCTAACCCAAATGGAGGGA
CCTGGAGGGGCATCTTCCTGAAGGAGGGAACACTTTTCCCTAGGGAATTC
CCCCCTTTGGCCCCCCCCGGAAAAGGGAATTTATACCCCAAACCCAAGGG
ATCCCAAAAAATAAGAGGACATTTGTCTATACCCAGAAATTCTCCAAATA
AGGAAAATTTGGGGGGGCGCTAATATCCCCTCCCTAAAATTGGGTAAAAA
ACACCTGCCGAGGTGGTTGAGTACACCATTGC

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCATTCATCAGCTATTATGTCAAGAACCGAGA
ATAAAACCCCAGTGTTTTGGATGTTATTTAGCATAAATAGCTGGACTTAC
CCCACACACTTACATTCTATATGTCAAGCAATGCTGAGAACTTTAGGGTT
TGGCTACTGGAGACATGAACATTAATTACACAGAGCTGAAAAGATTTCTA
GACTATCCCTATTAAAACAGGGTCATATTACAAACCCCTTGCCATAGTTT
TCAACAAAGAATGCTCTTTATAAATTGTAAAGCACACACATGAAATAGCT
CAGGTTTACTTCCTTTGCTTTAATAATTTTCTTTATTCCTGAGAATTTCA
TACATATAAACAGTAAAACTCAATCATTCCCAGCCGTGGAAGTTTTCTCC
CTTAACTTGCCCCAATCCATGCCACCGGTGCCTCTCCAAAGTTTGTGACT
TTAAATTCATTTTTTTAAATTAAAATGTAACTACATCATTTTCTCTATTT
CCCTTCCTGTTTCCAACCATACCCCACCTGATCTCTCCTGTATTCATGGC
CATTAAGAGCATATATGCTTTTCAATATATATGAAATATGTGTATCCCAT
AACCAAGGATAAACTTATATTTATACCTACATCCATTGGAGGAAAGGTGA
CCTTAAATTTATATAAAAGGCCGTAAACCCAATTAATTTTAATAATTTAT
ACTCCAAAAATATTTGCGCATA

Query= MSMg01no344_j19.g1 MSMg01no344_j19.g1 CHROMAT_FILE:
MSMg01no344_j19.g1 PHD_FILE: MSMg01no344_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:51 2005
         (494 letters)



>mm_chr6_4084791_4085683
          Length = 893

 Score =  909 bits (470), Expect = 0.0
 Identities = 488/494 (98%), Gaps = 1/494 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cattcatcagctattatgtcaagaaccgagaataaaaccccagtgttttggatgttattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 cattcatcagctattatgtcaagaaccgagaataaaaccccagtgttttggatgttattt 634

                                                                       
Query: 61  agcataaatagctggacttaccccacacacttacattctatatgtcaagcaatgctgaga 120
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 agcataaatatctggacttaccccacacacttacattctatatgtcaagcaatgctgaga 574

                                                                       
Query: 121 actttagggtttggctactggagacatgaacattaattacacagagctgaaaagatttct 180
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 acttta-ggtttggctactggagacatgaacattaattacacagagctgaaaagatttct 515

                                                                       
Query: 181 agactatccctattaaaacagggtcatattacaaaccccttgccatagttttcaacaaag 240
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 514 aggctatccctattaaaacagggtcatattacaaaccccttgccatagttttcaacagag 455

                                                                       
Query: 241 aatgctctttataaattgtaaagcacacacatgaaatagctcaggtttacttcctttgct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aatgctctttataaattgtaaagcacacacatgaaatagctcaggtttacttcctttgct 395

                                                                       
Query: 301 ttaataattttctttattcctgagaatttcatacatataaacagtaaaactcaatcattc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ttaataattttctttattcctgagaatttcatacatataaacagtaaaactcaatcattc 335

                                                                       
Query: 361 ccagccgtggaagttttctcccttaacttgccccaatccatgccaccggtgcctctccaa 420
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 334 ccagccgtggaagttttctcccttaactcgccccaatccatgccaccggtgcctctccaa 275

                                                                       
Query: 421 agtttgtgactttaaattcatttttttaaattaaaatgtaactacatcattttctctatt 480
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 274 agtttgtgactttaaattcattttttttaattaaaatgtaactacatcattttctctatt 215

                         
Query: 481 tcccttcctgtttc 494
           ||||||||||||||
Sbjct: 214 tcccttcctgtttc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 893
Length adjustment: 10
Effective length of query: 484
Effective length of database: 883
Effective search space:   427372
Effective search space used:   427372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)