Query= MSMg01no345_d23.b1 MSMg01no345_d23.b1 CHROMAT_FILE:
MSMg01no345_d23.b1 PHD_FILE: MSMg01no345_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:40 2005
(467 letters)
>mm_chr6_39914716_39915582
Length = 867
Score = 830 bits (429), Expect = 0.0
Identities = 453/461 (98%), Gaps = 2/461 (0%)
Strand = Plus / Minus
Query: 5 gaattcaagaaaatattgcccactttgattaatgaaatgaaatgtgaattttggaaccag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gaattcaagaaaatattgcccactttgattaatgaaatgaaatgtgaattttggaaccag 605
Query: 65 gagaatgataagatccttttcgaactgtgtactggtgaaaacctaaattacatgtcaacg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gagaatgataagatccttttcgaactgtgtactggtgaaaacctaaattacatgtcaacg 545
Query: 125 tctgccaggggttagccattcctttatccccagaggcagggagggtgagaaggaaatgta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tctgccaggggttagccattcctttatccccagaggcagggagggtgagaaggaaatgta 485
Query: 185 tgcattgagctcattttgcttctatttaaaatattccacaaatactcattaagcattgat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tgcattgagctcattttgcttctatttaaaatattccacaaatactcattaagcattgat 425
Query: 245 tgctcagtgcaaacactgttcaggtgccaagcctgggcagaggcacgggctgacccagaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgctcagtgcaaacactgttcaggtgccaagcctgggcagaggcacgggctgacccagaa 365
Query: 305 aagcccagggtatagaacacgccagccacggaacatccaaggtgctagaaggcctgtcag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 364 aagcccagggtatagaacacgccagccacggaacatccaaggtgctagaaggcctcttag 305
Query: 365 ggttctaaggatggtcaggccacagagccaggcacagctgagggatgttgaatacgagca 424
|| || |||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 304 gggtcaaaggatggtcagaccacagagccaggcacagctgagggatgttgaataccagca 245
Query: 425 gaacaaggtgagaggcactcttgactgggagg-aaagggca 464
|||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 244 gaacaaggtgagaggcactcttgactgg-agggaaagggca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_d23.g1 MSMg01no345_d23.g1 CHROMAT_FILE:
MSMg01no345_d23.g1 PHD_FILE: MSMg01no345_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:40 2005
(394 letters)
>mm_chr6_39886989_39887783
Length = 795
Score = 725 bits (375), Expect = 0.0
Identities = 390/395 (98%), Gaps = 1/395 (0%)
Strand = Plus / Plus
Query: 1 tcttggaccaggctatccaacctagcatccttgacccagaataaaagggtagccacccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttggaccaggctatccaacctagcatccttgacccagaataaaagggtagccacccag 260
Query: 61 atttcctttactcccaatttagttttagctgacattctgtagctcctcattattaacctt 120
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 261 atttcctttactcccaatttagttttagctgacattctgtagctccttaatattaacctt 320
Query: 121 ttattaagttgactcatttttcttcattgaatcttcattagcatgcaataaaatatccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttattaagttgactcatttttcttcattgaatcttcattagcatgcaataaaatatccat 380
Query: 181 atttcgagtttcttgtttgatgtgtgttgacatttgggtggaattgtcatctcaaacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttcgagtttcttgtttgatgtgtgttgacatttgggtggaattgtcatctcaaacaaa 440
Query: 241 atgaagagactttttgtcacctggctcctcctctttcagttctccatgctcccaaaaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaagagactttttgtcacctggctcctcctctttcagttctccatgctcccaaaaccc 500
Query: 301 tttactaagtttgtgaatcct-acggtaaggttagttgtacctactcttggtctacatgc 359
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttactaagtttgtgaatccttacggtaaggttagttgtacctactcttggtctacatgc 560
Query: 360 agatggaaattcctcaccctcatgcatatttaatt 394
|||||||||||| ||||||||||||| ||||||||
Sbjct: 561 agatggaaattcttcaccctcatgcacatttaatt 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 795
Length adjustment: 9
Effective length of query: 385
Effective length of database: 786
Effective search space: 302610
Effective search space used: 302610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
