Query= MSMg01no346_b12.b1 MSMg01no346_b12.b1 CHROMAT_FILE:
MSMg01no346_b12.b1 PHD_FILE: MSMg01no346_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:41 2005
(430 letters)
>mm_chr6_95887865_95888694
Length = 830
Score = 739 bits (382), Expect = 0.0
Identities = 401/408 (98%), Gaps = 3/408 (0%)
Strand = Plus / Plus
Query: 1 cagagctgtttgcctccatgtatgaattcagataatactaccattgtgtaagttttagct 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 cagagctgtttgcctccatgtatgaattcagataacactaccattgtgtaagttttagct 260
Query: 61 ataaaatgggtatatcatcagggaagccaaactctagcaacagactgacaggtacatatt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 ataaaatgggtatatcatcagggaagccaaactctagcaacagactgacaggcacatatt 320
Query: 121 caatgggagcagggcacacatgaatatatttagtctgtggtatacatgtgtgcatgtgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatgggagcagggcacacatgaatatatttagtctgtggtatacatgtgtgcatgtgtg 380
Query: 181 tgcatatgtatgtgcatgtgtgtatgcaaatgtgtatatgcacatgtgtatgtgtgcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcatatgtatgtgcatgtgtgtatgcaaatgtgtatatgcacatgtgtatgtgtgcatg 440
Query: 241 tgtgcttgtgtgtgtgtgtatgtgtgtatgtgtacttgcatgtgtgatggagttgtagag 300
||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 tgtgcttgtgtgtgtgt--atgtgtgtatgtgtacttgcatgcgtgatggagttgtagag 498
Query: 301 gccagaagctgacattgggtgttttccccaattgctctccacttccatctatctatctat 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 499 gccagaagctgacattgggtgttttccccaattgctctccacttctatctatctatctat 558
Query: 361 ctatctatctatctatctatctatctatctatctatctatctatctat 408
||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 559 ctatctatctatctatctatctatctatctatctatctatcta-ctat 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_b12.g1 MSMg01no346_b12.g1 CHROMAT_FILE:
MSMg01no346_b12.g1 PHD_FILE: MSMg01no346_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:41 2005
(550 letters)
>mm_chr6_96073257_96074207
Length = 951
Score = 1050 bits (543), Expect = 0.0
Identities = 549/551 (99%), Gaps = 1/551 (0%)
Strand = Plus / Minus
Query: 1 tgagaaatgtgtaactcagtcagttcattctttatcgacagaactgggaaacaagacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 tgagaaatgtgtaactcagtcagttcattctttatcgacagaactgggaaacaagacaat 692
Query: 61 ccctctgaatgtgtatactcagatggccttgatttgggattgaatggtgcaatgcatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ccctctgaatgtgtatactcagatggccttgatttgggattgaatggtgcaatgcatcct 632
Query: 121 aaaagataatgtctagtcaggatgtagtagaggtaaacactagtaatgccatgaaaatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 aaaagataatgtctagtcaggatgtagtagaggtaaacactagtaatgccatgaaaatag 572
Query: 181 tgaccataccagagggactcagggtcttctgcccttgtaggatctagtataagacttggt 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tgaccataccagaggggctcagggtcttctgcccttgtaggatctagtataagacttggt 512
Query: 241 ttgatgtctttcctacatgaaggaagtcttaaacaacagacaggacactcactcttcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ttgatgtctttcctacatgaaggaagtcttaaacaacagacaggacactcactcttcaat 452
Query: 301 tcatgataacactatttgtgttttcatttgggggcctcttattacataacatcaagaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tcatgataacactatttgtgttttcatttgggggcctcttattacataacatcaagaggg 392
Query: 361 gagaagaaagagtgggcttacagagttttccatgtgttttgaggatatctttgggggatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gagaagaaagagtgggcttacagagttttccatgtgttttgaggatatctttgggggatt 332
Query: 421 caattagtttacacaacttttttt-aaaaaataatcttttctttaccccagagaaagggg 479
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 331 caattagtttacacaactttttttaaaaaaataatcttttctttaccccagagaaagggg 272
Query: 480 aaattgcctgtctggtgttctctttggtacaaagatgaagtgatattttttttcttttga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaattgcctgtctggtgttctctttggtacaaagatgaagtgatattttttttcttttga 212
Query: 540 aatcaaaagac 550
|||||||||||
Sbjct: 211 aatcaaaagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 951
Length adjustment: 10
Effective length of query: 540
Effective length of database: 941
Effective search space: 508140
Effective search space used: 508140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
