AATTAGTCCTACATGTCANNANACGANTCACTATATTCAGXXXXXXXXXX
XXXXXXXXXXXTCTCTCCCTGCCTAGCAGCAACACACTGTTCTCACCCAA
GCACAGCAACAGTTCTGAGAACATCTGCTCTTGGTCTCTGTGTCCTGACA
AAGTACTACATTATACTTGATACCATCTTACTATACAAGTTGTTCATATT
TTAATGTCATTATTGCCCTCTAATGTCCAAGTCCTTTGATTAACCTGAAA
ATATGAGGCAAACAAACCTACATAGACGGTTTTTACCCAATCATTTCAGA
ATGTTGAATTCTGACTCAAATAAATAATATCTATATTAATTGTATCTAAA
GGAGGTATGTGTATATTCTCTCAAATGCTGCTGATACATCAAGTGTTCAT
TTTGTAGTGGAGAATCCAGGAAGATTCAAAAAAGAACTACAAGCTTTCTT
ATGGTAAAGCTGGAAGATACAGAGGATAGCAAGGATGCTCAAAGCATAAT
TTATTTATCACAGTANAGATATGTTATATGCATTCATAAAAACATCACAG
TAAAACTTATCACTTCTTATATGTTAACCAAATTAAAAACCAAGATTATA
TCGATTTTTTATAAGGAACCCTTATTGAAATGTGTCCTTGACCTTGCAAG
GGGGCGTTTTCAATGAGAACCACCGCGTTTTTGTAAAACAATATCATCCC
CTTTCAATAACATGAGACTTTTCTCCCGTGAAATCTTTCTTTTAAAAACC
ACCACTTGCAATTTTCTTGCTCTTTAATTTATATTAAA

NNNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATG
GCAGAGAAGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAAT
GCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTA
AGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGA
GGAACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTG
GAAATCAGTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGG
ATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGT
AAGAAGAACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGC
CAGAAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGA
AAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAAT
GAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCT
GAGTGAGGTAACACATTCACAAAGAAACTCACACAATATGTATTCACTGA
TAAGTGGATATAACCCCCAACCTAGGATATCCCAGAAATAAGATATATTT
TGCTTAACACTTGAAACTCAGAAAGAAGGAGAACTGAATGGGGACCCTAT
GCCCCCCC

Query= MSMg01no347_e21.b1 MSMg01no347_e21.b1 CHROMAT_FILE:
MSMg01no347_e21.b1 PHD_FILE: MSMg01no347_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:14 2005
         (451 letters)



>mm_chr6_32807177_32808026
          Length = 850

 Score =  694 bits (359), Expect = 0.0
 Identities = 426/459 (92%), Gaps = 20/459 (4%)
 Strand = Plus / Plus

                                                                       
Query: 8   ctgcctagcagcaacacactgttctcacccaagcacagcaacagttctgagaacatctgc 67
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 208 ctgcctagcagcaacacactgttctcacccaagcacagcagcagttctgagaacatctac 267

                                                                       
Query: 68  tcttggtctctgtgtcctgacaaagtactacattatacttgataccatcttactatacaa 127
           |||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 268 tcttggcctctgtgtcctgagaaattactacattatacttgataccatcttactatacaa 327

                                                                       
Query: 128 gttgttcatattttaatgtcattattgccctctaatgtccaagtcctttgattaacctga 187
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 328 gttgttcatattttaatgtcattattgccctctaatgcccaagtcctttgattaacctga 387

                                                                       
Query: 188 aaatatgaggcaaacaaacctacatagacggtttttacccaatcatttcagaatgttgaa 247
           ||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||
Sbjct: 388 aaatatgaggcaaacaaacctacatggacgatttttacccaatcatttcacaatgttgaa 447

                                                                       
Query: 248 ttctgactcaaataaataatatctatattaattgtatctaaaggaggtatgtgtatattc 307
            ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||
Sbjct: 448 atctgactcaaataaataatatctatattccttgtatctaaaggagctatgtgtatattc 507

                                                                       
Query: 308 tctcaaatgctgctgatacatcaagtgttcattttgtagtggagaatccaggaagattca 367
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 -ctcaaatgctgctgatacatcaagtgttcattttgtagtggagaatccaggaagattca 566

                                                                       
Query: 368 aaaaagaactacaagctttcttatggtaaagctggaagatacagag---gatagca---- 420
           ||||||||||||||||||||||||||||||||||||||||||||||   |||||||    
Sbjct: 567 aaaaagaactacaagctttcttatggtaaagctggaagatacagagaaggatagcatgcc 626

                                                  
Query: 421 --------aggatgctcaaagcataatttatttatcaca 451
                   ||||||||||||||||    |||||||||||
Sbjct: 627 ccctggcaaggatgctcaaagcat----tatttatcaca 661


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 850
Length adjustment: 10
Effective length of query: 441
Effective length of database: 840
Effective search space:   370440
Effective search space used:   370440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)