CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAAGGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAACCAGT
AGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAAT
CAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTA
CTTGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGAT
ACAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGA
TAGTATATATAAGTGACCCTAAAAATTCTACCAGAGAACTCCTAAACCTG
ATAAACAGCTTCGGTGAAGTAGCTGGATATAAAATAAACTCAAACAAGTC
AATGGCCTTTCTCTATACAAAGAATAAACAGGCTGAGAAAGAAATTAGGG
AAACAACACCCTTCTCAATAGTCACAAATAATATAAAATATCTTGGCGTG
ACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAATCTCT
GAAGAAAGAAATTAAGGAAGATCTCAGAAGATGGAGAGATCTCCCATGCT
CATGGATTGGGAGGAACAACATTGTAAAAATGCTTATTTTTGCCAAAGCA
ATCTACCGATTCTATGTTATTCCCNNNNAAATTCCAATCTCATCTTCCAA
AAANNNNAAAGAAAAATTGGAAATTTTTCTGGATAAACACCAATCCTAGA
AATGTCACAGCCTTTCCCGGAATAAAAAACAG

NNTTTCGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGAATAGGCAAACCCACAGT
AAGTCTCAGAAGGTACCAGGGAATGCCAGTAGTAGAAGGTGGGCAAAATC
AGGTGGGTGAAATCATCCAGTGCAGATGGGTAAGGAGCATGTGTGCTGTG
CTAAGGTTGAAGTTAAAGCTTTGGTCATCAGGCTTGTTGGTTTGAACCTG
ATCCCACGAGGCACGAGAAACCATCATGGCTTACAAGAACAGGAGTATGA
TGATCAGATTTGTAGAAACTGAGCTGCGTTGGGAAAGTGGATGTAAAGAG
GAAAGCACAAGATGGAAGCAGACACATCATAAGACATCTTGAGTCATGAG
TCCAGGTATGTCAAGGGACAAAGCCATCATGGGAGACAGAAAAAGGAGTG
TCAAGTTTGAGGAGGTTAGTAGAACATAATGATGACTTTGCTTTTCAAAT
CTGAGTAATTAAGAAAACACGGATGCATCCATTTGCTTAGGAATTTCATA
AATTCATTTTTTAAAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCA
CATTTTCTGTATCCATTCCTCCAGAGGTGTATCTGTGTTCTTTCCAGCTT
CTGTGTATTATAAATAACGCTGCTATGAACATATTGGAGCATGGTTATGG
GGGACTTCTGGTATACTTTTTCAATCGCCTTTGATTATATT

Query= MSMg01no347_n19.g1 MSMg01no347_n19.g1 CHROMAT_FILE:
MSMg01no347_n19.g1 PHD_FILE: MSMg01no347_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:58 2005
         (532 letters)



>mm_chr6_46950870_46951801
          Length = 932

 Score =  967 bits (500), Expect = 0.0
 Identities = 525/534 (98%), Gaps = 2/534 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tagaataggcaaacccacagtaagtctcagaaggtaccagggaatgccagtagtagaagg 60
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 640 tagaataggcaaacccacagtaagtctcagaaagtaccagggaatgccagtagtagaagg 581

                                                                       
Query: 61  tgggcaaaatcaggtgggtgaaatcatccagtgcagatgggtaaggagcatgtgtgctgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tgggcaaaatcaggtgggtgaaatcatccagtgcagatgggtaaggagcatgtgtgctgt 521

                                                                       
Query: 121 gctaaggttgaagttaaagctttggtcatcaggcttgttggtttgaacctgatcccacga 180
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 520 gctaaggttgaagttaaagcttcggtcatcaggcttgttggtttgaacctgatcccacga 461

                                                                       
Query: 181 ggcacgagaaaccatcatggcttacaagaacaggagtatgatgatcagatttgtagaaac 240
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 460 ggcacgagaaaccatcatggcttacaataacaggagtatgatgatcagatttgtagaaac 401

                                                                       
Query: 241 tgagctgcgttgggaaagtggatgtaaagaggaaagcacaagatggaagcagacacatca 300
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 400 tgagctgcgttgggaaagtggatgtaaagaggaaagtacaagatggaagcagacacatca 341

                                                                       
Query: 301 taagacatcttgagtcatgagtccaggtatgtcaagggacaaagccatcatgggagacag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 taagacatcttgagtcatgagtccaggtatgtcaagggacaaagccatcatgggagacag 281

                                                                       
Query: 361 aaaaaggagtgtcaagtttgaggaggttagtagaacataatgatgactttgcttttcaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aaaaaggagtgtcaagtttgaggaggttagtagaacataatgatgactttgcttttcaaa 221

                                                                       
Query: 421 tctgagtaattaagaaaacacggatgcatccatttgcttaggaatttcataaattca--t 478
           || |||||||| |||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 220 tccgagtaattgagaaaacacggatgcatccatttgcttaggaatttcataaattcattt 161

                                                                 
Query: 479 tttttaaaatagctgagtagtactccattgtgtaaatgtaccacattttctgta 532
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 160 tttttaaaatagctgagtagtactccattgtgtaaatgtaccacactttctgta 107


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space:   481284
Effective search space used:   481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)