CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTAGAAGTTCCCGAGTCAGCTAGCCTCATCAGCAGTGAACAACTAG
AGACTTTGGCTGAAGATGATTATTGACACTTAGGGCTGAATTTTGACTTC
CATTCACATGCCTGTTACATATACATATACAGACACTCACAGACGCACAC
ACACACACACACACACACACACACACACACGAACAAGAAAAGCAATATTC
TGAGGCAAAAATTGATAAAATGAGACTGCACAGGCTCTTTTTTAAAATAT
TTTTATTAGGTATTTTCCTCATTTACATTTCCAGTGCTATCCCAAAAGTC
CCCCATACCCTCCCCCCACACACACAGTCCCCTACCCACCCACTCCCACT
TTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCC
AATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACAT
ATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGT
TCCCCCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTGTAG
TTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATC
CACTTCCGNGCTTTGCACAGGCTCTCAATTTGCGAAACGGNNNNCCCTTG
GTCTGGTAAGGACCTTTCAAGTTTTTCCATGGTCCCTTTGTCCTACGGAA
AGGTTATTTTACTGATCACN

NGGGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTAAGGGTGAATTATAAGTATCC
ACTGGCAGTGGAAGAAGACACGGGCTGAGAAACTCTTTGGCATATAAAAG
TCTCAAGAGTGTATTGAGAAGGTTTTCTTGCTCTAGTGTTTAGTTGTTCA
ATAAAAATGTACAATACTTTGAAAAATACTCATAGATAATCTACTTTGAC
AAGATTTGTAAGGAATAGATACTAAGTAGCTCATGGTATGACACAGTTTT
TGTCTTTTCTTATTAAAATACATTTAACAATTTAGTGATTATGAATCTGC
AGAATTTTGTATTATGGTTTTATACAAGATCATTTTAATATTAAATTTAC
CATACATCCATAACAACCTATCAATTTTGTGTCTGCTTTAAGAGCTGTGT
GAATAGAAACTCCTACTGAGCATTCTCATTAGATTTTCAGTAAGCATTTT
AGTACTTACTGAATACTTATATTGTTTTTTCTTAGCTTTAGACAGGGTGA
ATAGTTAACACACTGGTTTTTGTGTGGTCAGTTTAAACAATGAAGATCCA
AGATGAAAGACGTCAGGGGAATAAGCACTTAATGACACAATACACACAAT
AATTCATGCTTGCTTCAGTGGCTGATAACTCTCAGAAAATACTAGTTACC
AGGAAAAGCAGTTAACAATTTTTGGTGGATTGATTTTTTCCAACC

Query= MSMg01no347_p17.g1 MSMg01no347_p17.g1 CHROMAT_FILE:
MSMg01no347_p17.g1 PHD_FILE: MSMg01no347_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:07 2005
         (661 letters)



>mm_chr6_76245569_76246632
          Length = 1064

 Score = 1133 bits (586), Expect = 0.0
 Identities = 644/664 (96%), Gaps = 3/664 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttaagggtgaattataagtatccactggcagtggaagaagacacgggctgagaaactctt 60
           |||| ||||||||||||| ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 864 ttaaaggtgaattataagcatccaatgacagtggaagaagacacgggctgagaaactctt 805

                                                                       
Query: 61  tggcatataaaagtctcaagagtgtattgagaaggttttcttgctctagtgtttagttgt 120
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tggcatatgaaagtctcaagagtgtattgagaaggttttcttgctctagtgtttagttgt 745

                                                                       
Query: 121 tcaataaaaatgtacaatactttgaaaaatactcatagataatctactttgacaagattt 180
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 744 tcaataaaaatgtacaatactttgaaaaatactcatagatgatctactttgacaagattt 685

                                                                       
Query: 181 gtaaggaatagatactaagtagctcatggtatgacacagtttttgtcttttcttattaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtaaggaatagatactaagtagctcatggtatgacacagtttttgtcttttcttattaaa 625

                                                                       
Query: 241 atacatttaacaatttagtgattatgaatctgcagaattttgtattatggttttatacaa 300
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 624 atacatttaacaatttagtgattatgaatctgcagaattttgcattatggttttatacaa 565

                                                                       
Query: 301 gatcattttaatattaaatttaccatacatccataacaacctatcaattttgtgtctgct 360
           ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 564 gatcattttaatattaaatttaccatacatctatagcaacctatcaattttgtgtctgct 505

                                                                       
Query: 361 ttaagagctgtgtgaatagaaactcctactgagcattctcattaga-ttttcagtaagca 419
           |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 504 ttaagagctgtgtgaatagaaactcctactgagcattctcattagatttttcaataagca 445

                                                                       
Query: 420 ttttagtacttactgaatacttatattgttttttcttagctttagacagggtgaatagtt 479
           ||||||||||||||||||| |||||||||| |||||||| ||| ||||||||||||||||
Sbjct: 444 ttttagtacttactgaataattatattgttctttcttagatttcgacagggtgaatagtt 385

                                                                       
Query: 480 aacacactggtttttgtgtggtcagtttaaacaatgaagatccaagatgaaagacgtcag 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aacacactggtttttgtgtggtcagtttaaacaatgaagatccaagatgaaagacgtcag 325

                                                                       
Query: 540 gggaataagcacttaatg--acacaatacacacaataattcatgcttgcttcagtggctg 597
           ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gggaataagcacttaatgacacacaatacacacaataattcatgcttgcttcagtggctg 265

                                                                       
Query: 598 ataactctcagaaaatactagttaccaggaaaagcagttaacaatttttggtggattgat 657
           ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||
Sbjct: 264 ataactctcagaaaatactagttaccaggaaaagcagataaaaatttttggtgtattgat 205

               
Query: 658 tttt 661
           ||||
Sbjct: 204 tttt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1064
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1054
Effective search space:   686154
Effective search space used:   686154
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)