XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
ACAAGATCCCCAAGAAGATGGAAAAGAGCGCAAAAGAAGGCACAAGAAAC
AGAGACCAACTCATCTGCATACTCAGGAGTCCCATAAAAAGCACTAAGCC
AGATGCTATAATTTATGTGTACAGAACGTGGTATAGACTTGTGCAGGCCC
TGTGTATGCTGCCCCAGGCTCTGTTCTCTATGTATTCGTATGAGATTTTA
TTGTGTCAGTACAACCGGCTTTGTTTTCATGTTGTCCTCTATCCACTCTG
GCTCCGACATCTTCTGCCTCCTCTGTCATAGGGTTCCTGAGCCCTGAGGG
GAGAGTGTTGAGAAGGATATCACATTTAAAGCTGAATGTTCTAAGGTTTC
TCATATTCTGAGTAATGTCTGGTTGTGAGTATGCGTATTTGTTCCCATCC
GCTGCAGGAAGAAGATACTTTGATGGTGGCTGAGTATCTATGCGTATAGC
AGAATGTCATTGGTCATTTTCTTGACACATTTTAATTTATTTCGATTTAT
TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT
ATTTATTTATTTATTTTAGAATAGTAGTATTTGCTTTTACCCTANGTCTT
TGTGCTGTCTAGTCTCAAGTTCTCGGTTACCCATCTCATGGAGTAACCAA
GGCTCTCTCTAGATAAGCTTCTCCT

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCTCTTTACTCTCAAAGTTATCAAGTCAGA
AACCATGTTGATGTAAAGGATGAAGGTAGGTGGGGTATAGAAGACTAAAC
CCTGCAGACCAACAGGATCCCTCAAATGAAAGCAGGAAAGTGATACTTGG
AGACATTTGCTCTGGAAGCCTGAGGAGATCGGTAATAATACATGATGTTT
ATTGGAAGGTAGGAGGAATGGGTAAAGGACATTGTGGGACTGGATCATGA
TTAGCAAAGAAAATGGATAGTCTTCAGGGTTGTCTATCTTTTATTTGCTT
CTCAGCCTTCTGTGAAGCATCTCTGATGGGCTTTTGCCCATCAGATAATG
TAAGGTTCTAGAGTGGAGGAAGACCGGCCTTTCCTTAAGAGGGTCTAGTG
CTGTGGCTGAGTGGAGCTACTACAGATTGGGAATCATTAGCTGAATCCAC
TCTGATGGGAAAGGAGCTATTCTCTGACAAGGGTGATGGAGACACAGAAA
GAAAGGGAAGGAGAATTGAGCATCACATGGAGGGAAGTTTGGCTTGGACC
AGTTTTTGTGGCTTTAATTAGTGGCAGCTAGAGAAAATTGCTTTCTTTTC
CTCACATATACATTTCATTAGAATGGCATCATCTCAGAACGTTTGGAAAA
ATCTTTCTGAAGACACCCACGGGGAGGCTCCCGGTTTTAAAN

Query= MSMg01no348_a20.g1 MSMg01no348_a20.g1 CHROMAT_FILE:
MSMg01no348_a20.g1 PHD_FILE: MSMg01no348_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:13 2005
         (540 letters)



>mm_chr6_36754068_36755008
          Length = 941

 Score = 1000 bits (517), Expect = 0.0
 Identities = 535/541 (98%), Gaps = 1/541 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctctttactctcaaagttatcaagtcagaaaccatgttgatgtaaaggatgaaggtagg 60
           ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 tctctttactctcgaagttatcaagtcagaaaccatgttgatgtaaaggatgaagggagg 260

                                                                       
Query: 61  tggggtatagaagactaaaccctgcagaccaacaggatccctcaaatgaaagcaggaaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggggtatagaagactaaaccctgcagaccaacaggatccctcaaatgaaagcaggaaag 320

                                                                       
Query: 121 tgatacttggagacatttgctctggaagcctgaggagatcggtaataatacatgatgttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatacttggagacatttgctctggaagcctgaggagatcggtaataatacatgatgttt 380

                                                                       
Query: 181 attggaaggtaggaggaatgggtaaaggacattgtgggactggatcatgattagcaaaga 240
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 attggaaggtaggaggaatgggtaaaggacattgtgggattggatcatgattagcaaaga 440

                                                                       
Query: 241 aaatggatagtcttcagggttgtctatcttttatttgcttctcagccttctgtgaagcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatggatagtcttcagggttgtctatcttttatttgcttctcagccttctgtgaagcat 500

                                                                       
Query: 301 ctctgatgggcttttgcccatcagataatgtaaggttctagagtggaggaagaccggcct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 ctctgatgggcttttgcccatcagataatgtaaggttctagagtggaggaagaccagcct 560

                                                                       
Query: 361 ttcctt-aagagggtctagtgctgtggctgagtggagctactacagattgggaatcatta 419
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcctttaagagggtctagtgctgtggctgagtggagctactacagattgggaatcatta 620

                                                                       
Query: 420 gctgaatccactctgatgggaaaggagctattctctgacaagggtgatggagacacagaa 479
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 621 gctgaatccactctgatgggaaaggagctattctttgacaagggtgatggagacacagaa 680

                                                                       
Query: 480 agaaagggaaggagaattgagcatcacatggagggaagtttggcttggaccagtttttgt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaaagggaaggagaattgagcatcacatggagggaagtttggcttggaccagtttttgt 740

            
Query: 540 g 540
           |
Sbjct: 741 g 741


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 941
Length adjustment: 10
Effective length of query: 530
Effective length of database: 931
Effective search space:   493430
Effective search space used:   493430
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)