Query= MSMg01no348_a22.b1 MSMg01no348_a22.b1 CHROMAT_FILE:
MSMg01no348_a22.b1 PHD_FILE: MSMg01no348_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:13 2005
(514 letters)
>mm_chr6_100273178_100274091
Length = 914
Score = 955 bits (494), Expect = 0.0
Identities = 509/514 (99%)
Strand = Plus / Minus
Query: 1 gctgcctgtgtgtgtagctgttccctggtggaaaaggcaagccaactgtgagctagatta 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 714 gctgcctgtgtgtgtagctgttccctggttgaaaaggcaagccaactgtgagctagatta 655
Query: 61 catgcagagagaataacaggagtggtgagatctgtgaggaggaagcaggcagtacgggaa 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 654 catgcagagagaataacaggagtggtgagatctgtgaggaggaagcagccagtacgggaa 595
Query: 121 tgggactgagcacccagagagagggggaaatagcttgggagaatgggaaccagtgatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tgggactgagcacccagagagagggggaaatagcttgggagaatgggaaccagtgatggt 535
Query: 181 gacaagatcttaggtgagccttactgtcaccctgtcaactttacctggagctgtgtcctg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 534 gacaagatcttaggtgagccttactgtcaccctgtcaactttacctggagctgtgtccag 475
Query: 241 ttgtaacatgtctggttttctatcttccagaaacactccccaaacaagcctcctgttcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ttgtaacatgtctggttttctatcttccagaaacactccccaaacaagcctcctgttcat 415
Query: 301 tgatgttttgtaacatggaggatgtgaggagatgcaggatggacagtcatcttaagggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tgatgttttgtaacatggaggatgtgaggagatgcaggatggacagtcatcttaagggct 355
Query: 361 gcagatattgaccaagagccaggtgattggtagctgtggtctgactggaagaaaggacag 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 354 gcagatattgaccaagagccaggtgattggtatctgtggtctgactggaagaaaggacag 295
Query: 421 ctttctggaaatctgtagaatctttgaaggaggcaggtcaacgtgttctggggatcaggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ctttctggaaatctgtagaatctttgaaggaggcaggtcaacgtgttctggggatcaggg 235
Query: 481 gtagggatacttaaacatgaagaggttgtttatt 514
|||||||||||||||| |||||||||||||||||
Sbjct: 234 gtagggatacttaaacgtgaagaggttgtttatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_a22.g1 MSMg01no348_a22.g1 CHROMAT_FILE:
MSMg01no348_a22.g1 PHD_FILE: MSMg01no348_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:14 2005
(457 letters)
>mm_chr6_100094092_100094949
Length = 858
Score = 862 bits (446), Expect = 0.0
Identities = 455/458 (99%), Gaps = 1/458 (0%)
Strand = Plus / Plus
Query: 1 ccattgagggggcagggagcacagcttgtctggtcccgggggaaataagcagcttgctaa 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 ccattgagggggcagggagcacagcttgtctggtcccaggggaaataagcagcttgctaa 260
Query: 61 ataaaatgctttgatgtcaaaaagtattggaggaagacaaatcgccagacacccct-ccc 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 ataaaatgctttgatgtcaaaaagtattggaggaagacaaatcgccagacacccctcccc 320
Query: 120 ccccccccaacggttgctgatttggtgagaccggagcccttccagcagtggtgatggaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccccccccaacggttgctgatttggtgagaccggagcccttccagcagtggtgatggaca 380
Query: 180 cgctgaactcatgagggccaccatttagtgagtactcacaaggtgttccttccaggacat 239
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 cgctgaactcatgagggccaccatttattgagtactcacaaggtgttccttccaggacat 440
Query: 240 tctttagttgcgcagctgggacaatgacagtgtgtcctttatgtgcagtgcctcctggcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctttagttgcgcagctgggacaatgacagtgtgtcctttatgtgcagtgcctcctggcc 500
Query: 300 aaatgtcaccagctctaagctacctcctcacttgagtgggctcccctatcacctagcagt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatgtcaccagctctaagctacctcctcacttgagtgggctcccctatcacctagcagt 560
Query: 360 gctgcagggacagggagtagctgtggacacctaaggagccctcaggcactgatagaggga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctgcagggacagggagtagctgtggacacctaaggagccctcaggcactgatagaggga 620
Query: 420 aattggtgggtcaagaggtagctcttctgctctgtgtg 457
||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aattggtgggtcaagaggtagctcttctgctctgtgtg 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 858
Length adjustment: 10
Effective length of query: 447
Effective length of database: 848
Effective search space: 379056
Effective search space used: 379056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
