Query= MSMg01no348_b14.b1 MSMg01no348_b14.b1 CHROMAT_FILE:
MSMg01no348_b14.b1 PHD_FILE: MSMg01no348_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:17 2005
(507 letters)
>mm_chr6_51740427_51741333
Length = 907
Score = 920 bits (476), Expect = 0.0
Identities = 497/504 (98%), Gaps = 2/504 (0%)
Strand = Plus / Plus
Query: 5 gaattctccaactgcgaggcatgtttcctcaacgccaacagagggaaggggcagcaggag 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccaactgggaggcatgtttcctcaacgccaacagagggaaggggcagcaggag 264
Query: 65 gaggatgcgttgggttgagctcagccagaagcgtgcagttttccctaaaagtctccaaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaggatgcgttgggttgagctcagccagaagcgtgcagttttccctaaaagtctccaaat 324
Query: 125 gcagagaagcgcttgcttgtcttgtttgcatgcaatgaaggtcaccacaaggtcactgtt 184
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 325 gcagagaagcgcttgcttgtcttgtttgcatgcaatgaaagtcaccacaaggtcactgtt 384
Query: 185 ggaagcggttagtccggtagatgatctgcttttgttgcttctcactggtgtgctgtgtgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggaagcggttagtccggtagatgatctgcttttgttgcttctcactggtgtgctgtgtgt 444
Query: 245 ctgcatgccttgtgtatgtatggaatcagtataccgtggcactgcccacttaagtgatgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgcatgccttgtgtatgtatggaatcagtataccgtggcactgcccacttaagtgatgg 504
Query: 305 caatgctctgttttagtctggagagagaaagcccaagtatatcctgttatgttcttacat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caatgctctgttttagtctggagagagaaagcccaagtatatcctgttatgttcttacat 564
Query: 365 ggtaatggggcttcctgaattcacctccgcagacagagtggcaggcatgttcattaaggt 424
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggtaatggggcctcctgaatccacctccgcagacagagtggcaggcatgttcattaaggt 624
Query: 425 cccaaagcccctatgatgatgtgggactcaacattcacacatccct-gtacctgatttac 483
||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||
Sbjct: 625 cccaaagcccctatgatgatgtgagactcaacattcacaca-cccttgtacctgatttac 683
Query: 484 acctcccacaggactctgccacct 507
||||||||||||||||||||||||
Sbjct: 684 acctcccacaggactctgccacct 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_b14.g1 MSMg01no348_b14.g1 CHROMAT_FILE:
MSMg01no348_b14.g1 PHD_FILE: MSMg01no348_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:17 2005
(486 letters)
>mm_chr6_51904935_51905820
Length = 886
Score = 901 bits (466), Expect = 0.0
Identities = 472/474 (99%)
Strand = Plus / Minus
Query: 1 tttgagggggggtgggggcagcatttgggatataaataaataatttaaaaaatattaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tttgagggggggtgggggcagcatttgggatataaataaataatttaaaaaatattaact 415
Query: 61 tagaactgcaggggggacatgtaaatggcaaggttgacagttaggtatgggcctggaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tagaactgcaggggggacatgtaaatggcaaggttgacagttaggtatgggcctggaact 355
Query: 121 aagaatgatttgggaactaaggaaaatattacacacttgaagaaaagtaggagtttttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aagaatgatttgggaactaaggaaaatattacacacttgaagaaaagtaggagtttttac 295
Query: 181 acattctggtataatttagatgtatttttatgcatctgttttagtttgtttgggttccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 acattctggtataatttagatgtatttttatgcatctgttttagtttgtttgggttccta 235
Query: 241 cagcatattatgttagactgcataagttagaaatgagaaaatattctgcttgcagtttgg 300
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 cagcaaaatatgttagactgcataagttagaaatgagaaaatattctgcttgcagtttgg 175
Query: 301 aagctggtaagtccaggatcaaggtcttagtaggcttactgtttgtgagagcctgttcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 aagctggtaagtccaggatcaaggtcttagtaggcttactgtttgtgagagcctgttcct 115
Query: 361 catagatggagctgttcaataacaaaaagacaatgcaacttaaagagcgcagaggctgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 catagatggagctgttcaataacaaaaagacaatgcaacttaaagagcgcagaggctgta 55
Query: 421 aggttgtaagtagtcatttgtccaaagaaagcatgcagggttcatgtgactatg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 aggttgtaagtagtcatttgtccaaagaaagcatgcagggttcatgtgactatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
