Query= MSMg01no348_c21.b1 MSMg01no348_c21.b1 CHROMAT_FILE:
MSMg01no348_c21.b1 PHD_FILE: MSMg01no348_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:23 2005
(223 letters)
>mm_chr6_17816773_17817395
Length = 623
Score = 329 bits (170), Expect = 9e-95
Identities = 196/218 (89%), Gaps = 22/218 (10%)
Strand = Plus / Minus
Query: 5 gaattccaaatggagacatagagatgacatttttactggaggaaataaaagggaaaggaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gaattccaaatggagacatagagatgacatttttactggaggaaataaaagggaaaggaa 271
Query: 65 gcacatgacagacacaaaacaatgaaaggaagtgaaaagagtcagcagctattctgtttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gcacatgacagacacaaaacaatgaaaggaagtgaaaagagtcagcagctattctgtttc 211
Query: 125 tttccaaataataataataataataataataataataataataataataataaaagaaat 184
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 210 tttcca---------------------aataataataataataataataataaaagaaat 172
Query: 185 aaacacaggtgggatagacgtactaaaagtacaaaacc 222
|||||||||||||||||||||||| |||||||||||||
Sbjct: 171 aaacacaggtgggatagacgtact-aaagtacaaaacc 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 623
Length adjustment: 9
Effective length of query: 214
Effective length of database: 614
Effective search space: 131396
Effective search space used: 131396
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no348_c21.g1 MSMg01no348_c21.g1 CHROMAT_FILE:
MSMg01no348_c21.g1 PHD_FILE: MSMg01no348_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:23 2005
(405 letters)
>mm_chr6_17686637_17687441
Length = 805
Score = 746 bits (386), Expect = 0.0
Identities = 401/406 (98%), Gaps = 3/406 (0%)
Strand = Plus / Plus
Query: 1 tgtaagtttctcgtagtgttgttgacctctctggcgtctacagattttccttctcttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tgtaagtttctcgtagtgttgttgacctctctggcgtctacagattttccttctcttctt 261
Query: 61 ctgctggattccccgagctccacttaatgattggctgtgggtctctgtatctgtgcccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctgctggattccccgagctccacttaatgattggctgtgggtctctgtatctgtgcccat 321
Query: 121 cagtttctgggtgaagcctctctgatgatggttctgctagttgcttttgtctgcaagtac 180
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 322 cagtttctgggtgaagcctttctggtgatggttctgctagttgcttttgtctgcaagtac 381
Query: 181 agcagaatgttttttaacagtgttggggttgtttccctctcatggtatgggtcccaagct 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agcagaatgttttt-aacagtgttggggttgtttccctctcatggtatgggtcccaagct 440
Query: 241 gaaccagtcattggttgaccactccctcaatttctgctccatctttactcac-gcacatc 299
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 441 gaaccagtcattggttgaccactccctcaatttctgctccatctttactc-ctgcacatc 499
Query: 300 ttgttctccaggaggatgatggggagagagagaatagtggaatagacaactggaatcagg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttgttctccaggaggatgatggggagagagagaatagtggaatagacaactggaatcagg 559
Query: 360 gtgcagggggtacatctctggaatgggctagaaacctaaagctatg 405
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtgcagggggtacatctctggaatgggctagaaacctaaagctatg 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
