Query= MSMg01no348_d06.b1 MSMg01no348_d06.b1 CHROMAT_FILE:
MSMg01no348_d06.b1 PHD_FILE: MSMg01no348_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:25 2005
(506 letters)
>mm_chr6_72320980_72321885
Length = 906
Score = 901 bits (466), Expect = 0.0
Identities = 493/502 (98%)
Strand = Plus / Plus
Query: 5 gaattccagagtattagcaaaccacaattcccttccctcagcctcgtccttcctagccta 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 205 gaattccagaggattagcaaaccacaattcccttccctcagcctcgtccttcccagccta 264
Query: 65 tccctattctgtctcctgtgcacagcaactgtcacccactaccccgcccccctttccggt 124
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccctattctgtctcctgtgcatagcaactgtcacccactaccccgcccccctttccggt 324
Query: 125 tgacccatatctccaactgtttgcagcagacagtttggcacttaacagaattccacctaa 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggcccatatctccaactgtttgcagcagacagtttggcacttaacagaattccacctaa 384
Query: 185 aaccagagaatttctgttggaagggacctggtagtcacagaggattcgctcctactcaag 244
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 385 aaccagaggatttctgttggaagggacctggtagtcacagaggattccctcctactcaag 444
Query: 245 caagaatcctcgcccaggatctttgcagctgccttatacacagcctcagagcattcccag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caagaatcctcgcccaggatctttgcagctgccttatacacagcctcagagcattcccag 504
Query: 305 ggcgtgagtcctgtctagatcacaagctcccagtgggagggcaggaagcagctccatcct 364
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 505 ggcgtgagtcctgtctagatcacaagctcccagtgggagggcagggggcagctccatcct 564
Query: 365 tcagcatccagaagccggggaggccaacacagggacccagtaaagggaccagttgcttca 424
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcagcatccagaagcccgggaggccaacacagggacccagtaaagggaccagttgcttca 624
Query: 425 ttgcctatcctaaaggaactctgtctcaagagaggttctcctggtttgcctatctagccc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttgcctatcctaaaggaactctgtctcaagagaggttctcctggtttgcctatctagccc 684
Query: 485 agcaagagtttcaggggacagg 506
||||||||||||||||||||||
Sbjct: 685 agcaagagtttcaggggacagg 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_d06.g1 MSMg01no348_d06.g1 CHROMAT_FILE:
MSMg01no348_d06.g1 PHD_FILE: MSMg01no348_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:25 2005
(465 letters)
>mm_chr6_72498962_72499826
Length = 865
Score = 833 bits (431), Expect = 0.0
Identities = 459/475 (96%), Gaps = 11/475 (2%)
Strand = Plus / Minus
Query: 1 acctcccgacaggttgatggcttctggggatctctcaggtctgacaccacctcctacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 acctcccgacaggttgatggcttctggggatctctcaggtctgacaccacctcctacaga 756
Query: 61 ccaggatgagcccagacccttcagctcctccccagcagctagaacacatcccacccacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ccaggatgagcccagacccttcagctcctccccagcagctagaacacatcccacccacac 696
Query: 121 ccactcaagactctgcagct-----------gctaatgacctgagctgacttatgcctgg 169
|||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 695 ccactcaagactctgcagctgcaaaactacagctaatgacctgagctgacttacgcctgg 636
Query: 170 ggacaccgttcccacctgttcccggaccctagcagccagccctcacctacccactcatga 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ggacaccgttcccacctgttcccggaccctagcagccagccctcacctacccactcatga 576
Query: 230 gagtcctagtcccttctctacagagcccttcccagttttacctctccacgggccttttct 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gagtcctagtcccttctctacagagcccttcccagttttacctctccacgggccttttct 516
Query: 290 tctcaaactcgtctcagcttgcccttcgctagctagcttctaacttccctcttcgccact 349
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 515 tctcaaactcgtctcagcttgcccctcgatagctagcttctaacttccctcttcgccact 456
Query: 350 gggctgccccgcccacctgccccacccatggggaggctcagtactcagaagtctaagggc 409
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gggctgccccacccacctgccccacccatggggaggctcagtactcagaagtctaagggc 396
Query: 410 tcaggaaagccagctccaaggctgggccatgtggatggaaggctgctatttctca 464
||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 395 tcaggaaagccagctccaaggctgggccatgcggatggaaggctgctatttctca 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
