XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
AGGCCCATTCCTAAACATAATAAAAGCAATCTACAGCAAACCAGTAGCCA
ACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAATCAGGG
ACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACTTGA
AGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAA
TTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTA
TATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAAACCTGATAAA
CAGCTTTGGTGAAGTAGCTGGATATAAAATTAACTCAAACAAGTCAATGG
CCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACA
ACACCCTTCTCAATAGTCACAAATAATATAAAATATCTCGGTGTGACTCT
AACTAAGGAAGTAAAAGATCTGTATGATAAAAACTTCAAGTCTCTGAAGA
AAGAAATTAAGGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGG
ATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTA
CAGATTCAATGCAATCCCTATCTAAATTCCAACTCAATTCTTTCACGAAA
TAAAAGGAGCAATTTGCTAATTCCTCTGGAACAA

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATGCAGAAACAGAGA
CTCCAAGTGAAGTTCTGGGCGAGTTTGTTTGATGACAGTTCTGCAGTATT
CATTCACAGGCAGACACGCAGGGGCCCAGAATGAACTGGGCCTCTAGGTC
AATGACCTTCCCCTTCACCACTGAGTCTGGTGAGTCACATGTGGAGTGTA
GCTATGTCCCCTTCACCACTGAGTCTGGTGAGTCACATGTGGAGTGTAGC
TATGTGATTAGTTTTTTTTTTTTTACTTGCCTTAGAGAAGGAGTCCAGAA
GGTTTTCCTTCCTTTCTCTCTCCCTTCTTCCCTCCCCTCTCCTTCCTTCC
CCATCTCTCTTTCCCTCCCTCCATCGCTTTCTCCCTCAATTGCTCCCTCC
CTCCATCACTCCCTCCCTCCTTCCCTTGCTTCCTTCCTTCCTCACTTTCT
GCTATAGNCACAGATCAGCTTGTTTCTCATCCACCATCAGAGACACTTCT
TTCTGAAGCAGATGGGAATACAAATAGAGACCCCCCCCCCCCGCCCCAAA
GGCAGATATACAAAGTGTGATAGATTCTGAATTAACCCCTATTGGCACGC
CTTCTACATATGCCTTTTTCCCAGGCTTGGCGAACATTCTCAACGAGGTC
TAAACAGTATTCAATCCTTATGTCACTCACGCTCTCCTTTTAT

Query= MSMg01no349_k02.g1 MSMg01no349_k02.g1 CHROMAT_FILE:
MSMg01no349_k02.g1 PHD_FILE: MSMg01no349_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:18 2005
         (482 letters)



>mm_chr6_6767860_6768745
          Length = 886

 Score =  524 bits (271), Expect = e-153
 Identities = 363/413 (87%), Gaps = 42/413 (10%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatgcagaaacagagactccaagtgaagttctgggcgagtttgtttgatgacagttctgc 60
           |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 377 tatgcagaaacagagactccaagtgaagttctgggcgagtctgtttgatgacaattctgc 318

                                                                       
Query: 61  agtattcattcacaggcagacacgcaggggcccagaatgaactgggc---ct-ctaggtc 116
           ||||||||||||||||||||||| |||||||||||||||||||||||   || |||||||
Sbjct: 317 agtattcattcacaggcagacacacaggggcccagaatgaactgggcacgcttctaggtc 258

                                                                       
Query: 117 aatgaccttccccttcaccactgagtctggtgagtcacatgtggagtgtagctatgtccc 176
           ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   
Sbjct: 257 aatgaccttccccttcaccactgagtctggtgagtcagatgtggagtgtagctatgt--- 201

                                                                       
Query: 177 cttcaccactgagtctggtgagtcacatgtggagtgtagctatgtgattagttttttttt 236
                     || ||  ||   |    | |    | |   | |    ||  |||||||||
Sbjct: 200 ----------gattc--gt---t----ttt----ttt---t-t----tt--ttttttttt 174

                                                                       
Query: 237 tttta-cttgccttagagaaggagtccagaaggttttccttcctttctctctcccttctt 295
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ttttaacttgccttagagaaggagtccagaaggttttccttcctttctctctcccttctt 114

                                                                       
Query: 296 ccctcccctctccttccttcccc-atctctctttccctccctccatcgctttctccctca 354
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 113 ccctcccctctccttccttcccccatctctctttccctccctccatcgctttctccctca 54

                                                                
Query: 355 attgctccctccctccatcactccctccctccttcccttgcttccttccttcc 407
           || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53  atcgctccctccctccatcactccctccctccttcccttgcttccttccttcc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 886
Length adjustment: 10
Effective length of query: 472
Effective length of database: 876
Effective search space:   413472
Effective search space used:   413472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)