Query= MSMg01no350_a11.b1 MSMg01no350_a11.b1 CHROMAT_FILE:
MSMg01no350_a11.b1 PHD_FILE: MSMg01no350_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:49 2005
(192 letters)
>mm_chr6_140570669_140571260
Length = 592
Score = 356 bits (184), Expect = e-103
Identities = 190/192 (98%)
Strand = Plus / Plus
Query: 1 aatgaatgagggaatgctctctgagactgcttccccactccagagcatcagatgtgcccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgaatgagggaatgctctctgagactgcttccccactccagagcatcagatgtgcccc 260
Query: 61 ggagtcagggtgtgatgtgggctgctcaccagccttcctcataaactccaggtctttatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagtcagggtgtgatgtgggctgctcaccagccttcctcataaactccaggtctttatt 320
Query: 121 ttacaattagcttatttacaaagcattcccttaccgagaagttcaggaagatgcaatgct 180
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacaaaaagcttatttacaaagcattcccttaccgagaagttcaggaagatgcaatgct 380
Query: 181 tccctagctgta 192
||||||||||||
Sbjct: 381 tccctagctgta 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 592
Length adjustment: 8
Effective length of query: 184
Effective length of database: 584
Effective search space: 107456
Effective search space used: 107456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no350_a11.g1 MSMg01no350_a11.g1 CHROMAT_FILE:
MSMg01no350_a11.g1 PHD_FILE: MSMg01no350_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:49 2005
(225 letters)
>mm_chr6_140766563_140767187
Length = 625
Score = 416 bits (215), Expect = e-121
Identities = 224/229 (97%), Gaps = 4/229 (1%)
Strand = Plus / Minus
Query: 1 tgctgaggagtctggccactcgctacttcaactagctagacaaggcatcaattgtctcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgctgaggagtctggccactcgctacttcaactagctagacaaggcatcaattgtctcgt 483
Query: 61 tttttatttgtttgcttgc----ttgtttgtttgtttgtttgtttgtttgtttgtttttc 116
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 482 tttttatttgtttgcttgcttgtttgtttgtttgtttgtttgtttgtttgtttgtttttc 423
Query: 117 gggttctattcctctttggggaaacctctctagtgtgtatctcagctttgccttagtttg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gggttctattcctctttggggaaacctctctagtgtgtatctcagctttgccttagtttg 363
Query: 177 ctgagttatagatggatgtgaaagttttacttctttcacatccatctca 225
|||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 362 ctgagttatagatggatgtgaaagttttacatctttcacatccatctca 314
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 625
Length adjustment: 9
Effective length of query: 216
Effective length of database: 616
Effective search space: 133056
Effective search space used: 133056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
