Query= MSMg01no350_f06.b1 MSMg01no350_f06.b1 CHROMAT_FILE:
MSMg01no350_f06.b1 PHD_FILE: MSMg01no350_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:13 2005
(447 letters)
>mm_chr6_50247770_50248616
Length = 847
Score = 737 bits (381), Expect = 0.0
Identities = 414/425 (97%), Gaps = 1/425 (0%)
Strand = Plus / Plus
Query: 23 ccacacgccaagctccacataatctttgaaatattgttttattagaacacagccctaccc 82
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ccacgcgccaagctccacataatctttgaaatattgttttattagaacacagccctaccc 282
Query: 83 tcttctttaaatattatctatggttgctttcatgttgaacaactgggctaattgctgagg 142
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tcttcttgaaatattatccatggttgctttcatgttgaacaactgggctaattgctgagg 342
Query: 143 ccttctggtctgccaagccagcagcatctgccatctgcttattatgggtaagcttggtga 202
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 343 ccttgtggtctgccaagccagcagcatctgccatctgcttattatgggtaagcttgttga 402
Query: 203 cctcagccattggggttcccatccctttttagacagttgagggatattccattgtgcgta 262
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 403 cctcagccattggggttcccatccctttttagacagttgagggatattccattgtgggta 462
Query: 263 tggatgacacttgccccactgacaggcagttaagccgccattatctccattaggaataaa 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tggatgacacttgccccactgacaggcagttaagccgccattatctccattaggaataaa 522
Query: 323 gcctatgtccttagtgatattttaattatttttttcagaggcacggttttgactttgttc 382
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 523 gcctatgtccttagtgatattttagttatttttttcagaggcacggttttgattttgttg 582
Query: 383 tcattattaacttgcctaggctggccttgaacttgcaatcctcctgtctcagtcttcctg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 583 tcattattaacttgcctaggctggccttgaacttgcaatcctcctgtctcagtct-ccgg 641
Query: 443 agcgt 447
|||||
Sbjct: 642 agcgt 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no350_f06.g1 MSMg01no350_f06.g1 CHROMAT_FILE:
MSMg01no350_f06.g1 PHD_FILE: MSMg01no350_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:13 2005
(330 letters)
>mm_chr6_50395409_50396138
Length = 730
Score = 638 bits (330), Expect = 0.0
Identities = 330/330 (100%)
Strand = Plus / Minus
Query: 1 attagttaccatggtgatatgtggctcaaagggaaagagtctggattttaattgggaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 attagttaccatggtgatatgtggctcaaagggaaagagtctggattttaattgggaccc 471
Query: 61 tggggagcaaagttctattttcctgtgggtcacaattcaggctgcaaagatctgaatgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tggggagcaaagttctattttcctgtgggtcacaattcaggctgcaaagatctgaatgag 411
Query: 121 gaaaagaagagagactgactgggatcctcccaggagaaggagacgtgccaagtcctgtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gaaaagaagagagactgactgggatcctcccaggagaaggagacgtgccaagtcctgtcc 351
Query: 181 ttttgtacctttcaggttgtaggaggccacgtggacttggggagaagggtttgaatttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ttttgtacctttcaggttgtaggaggccacgtggacttggggagaagggtttgaatttct 291
Query: 241 ttgatgctacacacagatttgtttatttactaattgggattgagtccaaagttgagtttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttgatgctacacacagatttgtttatttactaattgggattgagtccaaagttgagtttc 231
Query: 301 tgttacttctgtaactgaagctgaacaagg 330
||||||||||||||||||||||||||||||
Sbjct: 230 tgttacttctgtaactgaagctgaacaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
