Query= MSMg01no351_a19.b1 MSMg01no351_a19.b1 CHROMAT_FILE:
MSMg01no351_a19.b1 PHD_FILE: MSMg01no351_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:12 2005
(561 letters)
>mm_chr6_85952765_85953726
Length = 962
Score = 1033 bits (534), Expect = 0.0
Identities = 552/558 (98%), Gaps = 1/558 (0%)
Strand = Plus / Plus
Query: 5 gaattcactgtatttacggttttttgtgtaaaaaaatgtcttggaggaaaaagaaagtgg 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 205 gaattcactgtatttagggttttttgtgtaaaaaaatgtcttggaggaaaaagagagtgg 264
Query: 65 ataattgggcaaacgtctgactcttctgcactagggtcaggcaagttctgtactgggatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataattgggcaaacgtctgactcttctgcactagggtcaggcaagttctgtactgggatt 324
Query: 125 ctgaacccccagggaagctgccggacccgaggatacccaggagataaaacgcaggactta 184
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 ctgaacccccagggaagctgccggacttgaggatacccaggagataaaacgcaggactta 384
Query: 185 gctgaagtctggggaaggagagaggacagttgcaagctgtgtctgattctaggcattgct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctgaagtctggggaaggagagaggacagttgcaagctgtgtctgattctaggcattgct 444
Query: 245 cacttgagaatctaaaaggaagggctaaccaaaggaagcccgggaaaggagtttttaggt 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 cacttgagaatctaaaaggaagggctaaccgaaggaagcccgggaaaggagtttttaggt 504
Query: 305 actgatggtttagacataaaactaaccgacttggattctgggacagcgaaagtc-agtct 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 505 actgatggtttagacataaaactaaccgacttggattctgggacagcgaaagtccagtct 564
Query: 364 ggccacaccagattcagagactccttatttgtggagataaaactactgacttttgaaatc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggccacaccagattcagagactccttatttgtggagataaaactactgacttttgaaatc 624
Query: 424 tgggaaagggagcagacagttgcaagaaggaaagtaaaaattaccaacacctgtaagcaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgggaaagggagcagacagttgcaagaaggaaagtaaaaattaccaacacctgtaagcaa 684
Query: 484 agtagcaaaatcatcagcaagaacagcagaaactccctcaagtgactctctccgcctcca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtagcaaaatcatcagcaagaacagcagaaactccctcaagtgactctctccgcctcca 744
Query: 544 gcgtcctggaagggacaa 561
||||||||||||||||||
Sbjct: 745 gcgtcctggaagggacaa 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 962
Length adjustment: 10
Effective length of query: 551
Effective length of database: 952
Effective search space: 524552
Effective search space used: 524552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_a19.g1 MSMg01no351_a19.g1 CHROMAT_FILE:
MSMg01no351_a19.g1 PHD_FILE: MSMg01no351_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:12 2005
(549 letters)
>mm_chr6_86126584_86127532
Length = 949
Score = 717 bits (371), Expect = 0.0
Identities = 396/405 (97%), Gaps = 2/405 (0%)
Strand = Plus / Minus
Query: 145 tgatgtcacttgtgtggtgagtgcgcatatgcacatgcacatgtgtgtgtgtgtctacac 204
|||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 949 tgatgtcacttgtgtggtgagtgcgcatatgcacgtgcaca--tgtgtgtgtgtctacac 892
Query: 205 atgtgtgtgcgtgcacatatgtgtgtgcgctgtgcaagtgccacagcacttctgtggaga 264
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 atgtgtgtgcgtgcacatgtgtgtgtgcgctgtgcaagtgccacagcacttctgtggaga 832
Query: 265 tcagaggacaactgtgggctccggggttcaaactcaggttgtcgggttcgacagcaagca 324
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 831 tcagaggacaaccgtgggctccggggttcaaactcaggttgtcgggttctacagcaagca 772
Query: 325 tctctacttgctgagccatctctatgctcctagttctcaatattgaattcacacgcagtc 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 tctctacttgctgagccatctctatgctcctagttctcaatattgaattcacacgcagtc 712
Query: 385 tccaggctattgtagttaaaaagtccttataacctcccagtcaagctggatattgacatc 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 tccaggctattgtagttaaaaagtccttataacctcccagtcaagctggatattgacatc 652
Query: 445 caaagtgaacttagaagccaccgcaggttccatctgtcccggtccagggatgcctgtgta 504
||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 651 caaggtgaacttagaagccacagtaggttccatctgtcccggtccagggatgcctgtgta 592
Query: 505 gcacagcctttcccaagtcccactataaaccaggactatcacatt 549
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gcacagcctttcccaagtcccactataaaccaggactatcacatt 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
