Query= MSMg01no352_h18.b1 MSMg01no352_h18.b1 CHROMAT_FILE:
MSMg01no352_h18.b1 PHD_FILE: MSMg01no352_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:03 2005
(251 letters)
>mm_chr6_61139553_61140203
Length = 651
Score = 455 bits (235), Expect = e-132
Identities = 244/247 (98%)
Strand = Plus / Plus
Query: 5 gaattccagtatatccccatgtctataccaaatctccacttgaactgttatagaccgttg 64
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagtaaaaccccatgtctataccaaatctccacttgaactgttatagaccgttg 264
Query: 65 tttgcttggactacatgccctgtcagggcaacgggcttaaatttttcttattttccatct 124
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 265 tttgcttggactacatgccctgtcagggcaaagggcttaaatttttcttattttccatct 324
Query: 125 gaatcaggtctaaaacaaacacatgaagattcttggtaagagtaagtttatcggtaagaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaatcaggtctaaaacaaacacatgaagattcttggtaagagtaagtttatcggtaagaa 384
Query: 185 aaagattacttggttgaataaactcagtgcttcgtcagagtgacttgagtttggaggatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaagattacttggttgaataaactcagtgcttcgtcagagtgacttgagtttggaggatt 444
Query: 245 ggggtgg 251
|||||||
Sbjct: 445 ggggtgg 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no352_h18.g1 MSMg01no352_h18.g1 CHROMAT_FILE:
MSMg01no352_h18.g1 PHD_FILE: MSMg01no352_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:03 2005
(406 letters)
>mm_chr6_61329649_61330452
Length = 804
Score = 758 bits (392), Expect = 0.0
Identities = 402/406 (99%), Gaps = 2/406 (0%)
Strand = Plus / Minus
Query: 1 ctagtccacagaagaattcttataatgactctcatcaaattcaaaatatttagcaactac 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ctagcccacagaagaattcttataatgactctcatcaaattcaaaatatttagcaactac 545
Query: 61 ctaattaatttctaattgataatggtgggccattacctccatttgtttgtggacatacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ctaattaatttctaattgataatggtgggccattacctccatttgtttgtggacatacat 485
Query: 121 caaaaccaatgttctgagtacttcagaagtaaacccaaaataaataacaggagtaataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 caaaaccaatgttctgagtacttcagaagtaaacccaaaataaataacaggagtaataaa 425
Query: 181 ttccagtacacacctaactattgcattcttttttttttatcaaagaacatttactagttt 240
|||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 424 ttccagtacacacctaactattgcattc--ttttttttctcaaagaacatttactagttt 367
Query: 241 aaatttattttacttaagtatcccatctttaagtggtaaagtcaaaaccaatggtaatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaatttattttacttaagtatcccatctttaagtggtaaagtcaaaaccaatggtaatgc 307
Query: 301 aagcaacagcctatgttctttatcaaacattgatgagatttgtttctagtgtttaatgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aagcaacagcctatgttctttatcaaacattgatgagatttgtttctagtgtttaatgta 247
Query: 361 tttaaaagagaaatgcgttttatctcagctatattgctatcctaag 406
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttaaaagagaaatgcgttttatctcagctatattgctatcctaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 804
Length adjustment: 9
Effective length of query: 397
Effective length of database: 795
Effective search space: 315615
Effective search space used: 315615
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
