Query= MSMg01no355_d20.b1 MSMg01no355_d20.b1 CHROMAT_FILE:
MSMg01no355_d20.b1 PHD_FILE: MSMg01no355_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:38 2005
(552 letters)
>mm_chr6_115026554_115027505
Length = 952
Score = 1021 bits (528), Expect = 0.0
Identities = 543/548 (99%)
Strand = Plus / Minus
Query: 5 gaattcttttatgcgctttatgatgctaagacaccaaaaaaatgtgaccagagatgtatg 64
||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 752 gaattcttttaggggctttatgatgctaagacaccaaaaaaatgtgacccgagatgtatg 693
Query: 65 ggtccttgacttacctttcagaggagaaagctgagattggttgagagccttttgttttgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ggtccttgacttacctttcagaggagaaagctgagattggttgagagccttttgttttgc 633
Query: 125 taactggagatgtagtttgaagccctggcggttggacaacagagagtaaatactgccaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 taactggagatgtagtttgaagccctggcggttggacaacagagagtaaatactgccaag 573
Query: 185 aggcctatttgtttgcattctcaacgcccaacagcatccagcctcatctccaaacactcg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aggcctatttgtttgcattctcaacgcccaacagcatccagcctcatctccaaacactcg 513
Query: 245 cttagacattcgaagaatgagggcttaaagaggcgcctgattgattattagtctgcttgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 cttagacattcgaagaatgagggcttaaagaggcgcctgattgattattagtctgcttgg 453
Query: 305 aagaatgctcaccaacgtctggctcctttcctccttctgagtacatagaaagaggctcac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aagaatgctcaccaacgtctggctcctttcctccttctgagtacatagaaagaggctcac 393
Query: 365 ttccagccctctgcagtgacacagggcttggtggctaatgctggctgtcaggctgctagc 424
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 392 ttccagccctctgcagtgacacagggcttggtggctaatgctggctggcaggctgctagc 333
Query: 425 agaggtaacaaatttcatgtccataacagaagcttcctggagctgctaggtgtgcctggc 484
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 332 agaggtaacaaatttcatgtccataagagaagcttcctggagctgctaggtgtgcctggc 273
Query: 485 ttctctcttccccagtagggggtctttgctcagggctgggagccacaaacagaagcagcc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ttctctcttccccagtagggggtctttgctcagggctgggagccacaaacagaagcagcc 213
Query: 545 tctaatct 552
||||||||
Sbjct: 212 tctaatct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space: 510564
Effective search space used: 510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_d20.g1 MSMg01no355_d20.g1 CHROMAT_FILE:
MSMg01no355_d20.g1 PHD_FILE: MSMg01no355_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:38 2005
(212 letters)
>mm_chr6_114805670_114806282
Length = 613
Score = 339 bits (175), Expect = 1e-97
Identities = 201/213 (94%), Gaps = 7/213 (3%)
Strand = Plus / Plus
Query: 1 cctgtccctcccagaagagaggtagggagcaggatgtgcagaggcccgcagagtcttt-- 58
||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 201 cctgtccctcccagaagagaggtggggagcaggatgtgcagaggcccacagaggc---cc 257
Query: 59 --atagtcaggcatgaggagtgccagccccaactctcacaagctgcaatgtggcttaaga 116
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 258 gcagagtcaggcatgaggagtgccagccccaactttcacaagctgcaatgtggcttaaga 317
Query: 117 tgtttacattagcaaatgaacacttttaacacaccccaaaatataattgtgttattcccg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tgtttacattagcaaatgaacacttttaacacaccccaaaatataattgtgttattcccg 377
Query: 177 ggtgatgacagtgtgtatggaagaggccccttg 209
|||||||||||||||||||||||||||||||||
Sbjct: 378 ggtgatgacagtgtgtatggaagaggccccttg 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 613
Length adjustment: 9
Effective length of query: 203
Effective length of database: 604
Effective search space: 122612
Effective search space used: 122612
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
